RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TCIRG1Q13488 830 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GRAPQ13588 217 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CUL2Q13617 745 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 APOFQ13790 326 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CLEC16AQ2KHT3 1053 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LSM12Q3MHD2 195 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 RNF212Q495C1 297 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ATP6AP1LQ52LC2 224 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 AGKQ53H12 422 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PCID2Q5JVF3 399 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LIPMQ5VYY2 423 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RPL13AP3Q6NVV1 102 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZNF549Q6P9A3 640 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MOXD1Q6UVY6 613 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM198BQ6UWH4 519 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CASP12Q6UXS9 341 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SMIM5Q71RC9 77 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NECAB2Q7Z6G3 386 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TAF8Q7Z7C8 310 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ALYREFQ86V81 257 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PDZD9Q8IXQ8 264 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DSELQ8IZU8 1212 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.21□□□□□ -2.06
USP53-202ENST00000450251 CDYL2Q8N8U2 506 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GDPD1Q8N9F7 314 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 OR5K1Q8NHB7 308 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CCDC107Q8WV48 283 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 C7orf43Q8WVR3 580 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GJA10Q969M2 543 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC35B4Q969S0 331 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KIAA1143Q96AT1 154 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TESCQ96BS2 214 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RADILQ96JH8 1075 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SECISBP2Q96T21 854 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 AIF1LQ9BQI0 150 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 C7orf50Q9BRJ6 194 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ZNF577Q9BSK1 485 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 IDI2Q9BXS1 227 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CEP41Q9BYV8 373 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RPF2Q9H7B2 306 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 NT5DC2Q9H857 520 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ERVMER34-1Q9H9K5 563 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SYTL2Q9HCH5 934 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TMEM138Q9NPI0 162 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RASSF1Q9NS23 344 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LRRC4BQ9NT99 713 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MORF4L1Q9UBU8 362 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KIF25Q9UIL4 384 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SAMD4AQ9UPU9 718 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.21□□□□□ -2.06
USP53-202ENST00000450251 FIS1Q9Y3D6 152 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PCDHGB6Q9Y5F9 930 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SPO11Q9Y5K1 396 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ADGRB1O14514 1584 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 COL16A1Q07092 1604 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 CRB1P82279 1406 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CYP2D7A0A087X1C5 515 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 A0A0B4J269 797 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TESPA1A2RU30 521 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 UNCXA6NJT0 531 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PRR5-ARHGAP8B1AHC4 643 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 C9IYK1 514 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CDC7O00311 574 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 E2F3O00716 465 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DDX3YO15523 660 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 DCXO43602 365 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PRAF2O60831 178 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 UGT2B17O75795 530 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DGKIO75912 1065 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CHRNA1P02708 482 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SMIM6P0DI80 62 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RALAP11233 206 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CD19P15391 556 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NFKB1P19838 968 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ACO1P21399 889 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PPIBP23284 216 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 AGTR1P30556 359 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CALCRP30988 508 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC6A4P31645 630 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SOX11P35716 441 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PTGIRP43119 386 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZNF135P52742 658 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 EEFSECP57772 596 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ARHGAP8P85298 464 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CDKL1Q00532 357 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DEFA5Q01523 94 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GNA12Q03113 381 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 BST1Q10588 318 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TUBB3Q13509 450 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 UBAP2LQ14157 1087 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PDK1Q15118 436 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 BAK1Q16611 211 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FSCN1Q16658 493 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 BSPRYQ5W0U4 402 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ELP2Q6IA86 826 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NAPEPLDQ6IQ20 393 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 XRRA1Q6P2D8 792 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DPP8Q6V1X1 898 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 DEF8Q6ZN54 512 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ARHGAP36Q6ZRI8 547 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms