RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 LRRN4Q8WUT4 740 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 FAF2Q96CS3 445 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 RNF157Q96PX1 679 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 DUSP23Q9BVJ7 150 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 MAK16Q9BXY0 300 aaKnown RBP17.59■□□□□ 0.41
FAM3A-216ENST00000449971 HYOU1Q9Y4L1 999 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 KIF26BQ2KJY2 2108 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 A0A1W2PQ67 120 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CFAP69A5D8W1 941 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 TOR1BO14657 336 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 MATN3O15232 486 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 HTRA2O43464 458 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 SOCS5O75159 536 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 TNFSF15O95150 251 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CPP00450 1065 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 ELFN1P0C7U0 828 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 NME1P15531 152 aaKnown RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 JUNDP17535 347 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 MX2P20592 715 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CCNCP24863 283 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 SLC1A1P43005 524 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 RALGDSQ12967 914 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 EIF2B5Q13144 721 aaKnown RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 TCEAL1Q15170 157 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 SPA17Q15506 151 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 RALGPS1Q5JS13 557 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 LIPIQ6XZB0 460 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 DPPA4Q7L190 304 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CCNYQ8ND76 341 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 ZNF548Q8NEK5 533 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 CCDC97Q96F63 343 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 MRFAP1L1Q96HT8 127 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 TSGA13Q96PP4 275 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 SEMA3CQ99985 751 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 RBM22Q9NW64 420 aaKnown RBP eCLIP17.58■□□□□ 0.4
FAM3A-216ENST00000449971 KLF15Q9UIH9 416 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 ENTPD2Q9Y5L3 495 aa17.58■□□□□ 0.4
FAM3A-216ENST00000449971 SPOPO43791 374 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 RECQL5O94762 991 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 KRT1P04264 644 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 PCCBP05166 539 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 COMTP21964 271 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 CYLC1P35663 651 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 SLC10A2Q12908 348 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 TRAF2Q12933 501 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 INPP5AQ14642 412 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 FAXCQ5TGI0 409 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 LRRC38Q5VT99 294 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 RBM44Q6ZP01 1051 aaKnown RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 GAS2L3Q86XJ1 694 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 RHOT1Q8IXI2 618 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 CCDC170Q8IYT3 715 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 LMX1AQ8TE12 382 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 BTN2A2Q8WVV5 523 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 RNF25Q96BH1 459 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 ZNF830Q96NB3 372 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 POLR1EQ9GZS1 481 aaKnown RBP17.57■□□□□ 0.4
FAM3A-216ENST00000449971 B4GALT6Q9UBX8 382 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 TTLL3Q9Y4R7 772 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 PCDHA13Q9Y5I0 950 aa17.57■□□□□ 0.4
FAM3A-216ENST00000449971 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-216ENST00000449971 AQP9O43315 295 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 CCNB1P14635 433 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 NFKBIAP25963 317 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 CSRP3P50461 194 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 PEX5P50542 639 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 CLN3Q13286 438 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 ACOX1Q15067 660 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 AGERQ15109 404 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 ZCCHC8Q6NZY4 707 aaKnown RBP17.56■□□□□ 0.4
FAM3A-216ENST00000449971 RFX6Q8HWS3 928 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 RBFAQ8N0V3 343 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 ARL14Q8N4G2 192 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
FAM3A-216ENST00000449971 MAML1Q92585 1016 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 PANX2Q96RD6 677 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 APOOQ9BUR5 198 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 SLC13A1Q9BZW2 595 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 TCEAL2Q9H3H9 227 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-216ENST00000449971 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 HAUS2Q9NVX0 235 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 DDX56Q9NY93 547 aaKnown RBP17.56■□□□□ 0.4
FAM3A-216ENST00000449971 DTLQ9NZJ0 730 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 SPASTQ9UBP0 616 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 TFR2Q9UP52 801 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 OR1A2Q9Y585 309 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 HEY1Q9Y5J3 304 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 RP1P56715 2156 aa17.56■□□□□ 0.4
FAM3A-216ENST00000449971 ZNF487B1APH4 448 aa17.55■□□□□ 0.4
FAM3A-216ENST00000449971 AGRPO00253 132 aa17.55■□□□□ 0.4
FAM3A-216ENST00000449971 APOL1O14791 398 aa17.55■□□□□ 0.4
FAM3A-216ENST00000449971 PGLSO95336 258 aa17.55■□□□□ 0.4
FAM3A-216ENST00000449971 LCA5LO95447 670 aa17.55■□□□□ 0.4
FAM3A-216ENST00000449971 CES1P23141 567 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms