RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 KCTD3Q9Y597 815 aa14.07□□□□□ -0.16
SHMT2-203ENST00000449049 FADS3Q9Y5Q0 445 aa14.07□□□□□ -0.16
SHMT2-203ENST00000449049 RPS6KL1Q9Y6S9 549 aa14.07□□□□□ -0.16
SHMT2-203ENST00000449049 ZCWPW2A0A1B0GU75 182 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 H0Y858 1186 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 RIPK2O43353 540 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 SPAG6O75602 509 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 SEMG2Q02383 582 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 FRG1Q14331 258 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 UAP1Q16222 522 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 CNGA3Q16281 694 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 TMEM52BQ4KMG9 183 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 KIAA1324Q6UXG2 1013 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ZNF669Q96BR6 464 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 FCRL3Q96P31 734 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 NLE1Q9NVX2 485 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 IL17CQ9P0M4 197 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 GGT7Q9UJ14 662 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ITM2BQ9Y287 266 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 FAM169AQ9Y6X4 670 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 A8MX80 341 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 PI15O43692 258 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ALDH1A2O94788 518 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 C1SP09871 688 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ACADMP11310 421 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 SSTR1P30872 391 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 PTSQ03393 145 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ARHGEF7Q14155 803 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ESRP1Q6NXG1 681 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 CES3Q6UWW8 571 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 RASSF3Q86WH2 238 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 CBARPQ8N350 705 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 GSDMBQ8TAX9 411 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 HHIPQ96QV1 700 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 FUT8Q9BYC5 575 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ARFGAP3Q9NP61 516 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 ITM2CQ9NQX7 267 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
SHMT2-203ENST00000449049 SLC2A6Q9UGQ3 507 aa14.06□□□□□ -0.16
SHMT2-203ENST00000449049 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PSMD11O00231 422 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 BUD23O43709 281 aaKnown RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 ACSL3O95573 720 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 IGLV3-19P01714 112 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 ABHD2P08910 425 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 HSD17B3P37058 310 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 TPMTP51580 245 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 CLCN5P51795 746 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 STC1P52823 247 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PTPRCAPQ14761 206 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 SKIDA1Q1XH10 827 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 KIAA0930Q6ICG6 404 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 ANO7Q6IWH7 933 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 LIPIQ6XZB0 460 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 C3orf62Q6ZUJ4 267 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 RAVER1Q8IY67 606 aaKnown RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 CAMKK1Q8N5S9 505 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 OR4K2Q8NGD2 314 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 OR13C4Q8NGS5 318 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 UBLCP1Q8WVY7 318 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 EBF1Q9UH73 591 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 NCKAP1Q9Y2A7 1128 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 STX7O15400 261 aaKnown RBP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 TSPAN6O43657 245 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 APBB3O95704 486 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 SLC4A1P02730 911 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 PAMP19021 973 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 CCR3P51677 355 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 ADPRHP54922 357 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 CAPN12Q6ZSI9 719 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 CYS1Q717R9 158 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 GANCQ8TET4 914 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 VPS37BQ9H9H4 285 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 MOCS1Q9NZB8 636 aa14.05□□□□□ -0.16
SHMT2-203ENST00000449049 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHMT2-203ENST00000449049 TCRBV9S1A1TA0A576 114 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 H7C0S8 307 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 RPP40O75818 363 aaKnown RBP14.04□□□□□ -0.16
SHMT2-203ENST00000449049 ELFN1P0C7U0 828 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 ARNTP27540 789 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 PHBP35232 272 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 HADHAP40939 763 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 CXCL12P48061 93 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 LIG3P49916 1009 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 ARSDP51689 593 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 HSD11B1LQ7Z5J1 315 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 PGBD3Q8N328 593 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 KDM4CQ9H3R0 1056 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
SHMT2-203ENST00000449049 NEMP1O14524 444 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms