RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CARS2Q9HA77 564 aaKnown RBP15.55■□□□□ 0.08
TRA2A-203ENST00000448549 RDH14Q9HBH5 336 aa15.55■□□□□ 0.08
TRA2A-203ENST00000448549 FOXJ2Q9P0K8 574 aa15.55■□□□□ 0.08
TRA2A-203ENST00000448549 CNOT8Q9UFF9 292 aaKnown RBP15.55■□□□□ 0.08
TRA2A-203ENST00000448549 MYO6Q9UM54 1294 aa15.55■□□□□ 0.08
TRA2A-203ENST00000448549 HTRA2O43464 458 aaPredicted RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 SLC28A2O43868 658 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 CCNB1P14635 433 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ETV3P41162 512 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ZNF135P52742 658 aaPredicted RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 MAPK10P53779 464 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 MAZP56270 477 aaKnown RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 OR1D5P58170 312 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ZNF235Q14590 738 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ASIC2Q16515 512 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 TSR1Q2NL82 804 aaKnown RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 LINC00303Q3SY05 128 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 AMZ1Q400G9 498 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ZNF571Q7Z3V5 609 aaPredicted RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 HEATR4Q86WZ0 1026 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 NRROSQ86YC3 692 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 PGBD5Q8N414 524 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 LZTR1Q8N653 840 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 AOPEPQ8N6M6 819 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 KIAA1524Q8TCG1 905 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 GPBAR1Q8TDU6 330 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 FNIP1Q8TF40 1166 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 SPOCK2Q92563 424 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 TEX101Q9BY14 249 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ZWILCHQ9H900 591 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 NOD2Q9HC29 1040 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 PHPT1Q9NRX4 125 aaPredicted RBP15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ETNK2Q9NVF9 386 aa15.54■□□□□ 0.08
TRA2A-203ENST00000448549 ASH1LQ9NR48 2969 aaKnown RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 SOCS5O75159 536 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 HEXIM1O94992 359 aaKnown RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 CPNE6O95741 557 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 PEX11BO96011 259 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 CPP00450 1065 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 FGF1P05230 155 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 CEACAM5P06731 702 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 CR2P20023 1033 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 AMPD1P23109 780 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 IL1R2P27930 398 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 ALDH4A1P30038 563 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 VIPR1P32241 457 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 GNPDA1P46926 289 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 ILF3Q12906 894 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 C16orf72Q14CZ0 275 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 PTPRRQ15256 657 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 MAP9Q49MG5 647 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 E4F1Q66K89 784 aaPredicted RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 HSD11B1LQ7Z5J1 315 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 VASH2Q86V25 355 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 PIM3Q86V86 326 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 C17orf82Q86X59 251 aaPredicted RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 CBARPQ8N350 705 aaPredicted RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 ZDHHC1Q8WTX9 485 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 PTCD2Q8WV60 388 aaKnown RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 EXTL1Q92935 676 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 ZNF653Q96CK0 615 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 NUDCD1Q96RS6 583 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 GSDMCQ9BYG8 508 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
TRA2A-203ENST00000448549 SEPT10Q9P0V9 454 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 TAAR2Q9P1P5 351 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 MYO1AQ9UBC5 1043 aa15.53■□□□□ 0.08
TRA2A-203ENST00000448549 A0A1W2PQ67 120 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 GOLGA6CA6NDK9 693 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 GOLGA6BA6NDN3 693 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 RHPN2P1A8MT19 583 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 C9orf172C9J069 976 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 H3BRJ5 948 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 DDX3XO00571 662 aaKnown RBP eCLIP15.52■□□□□ 0.084e-21■■■■■ 31.7
TRA2A-203ENST00000448549 MAFKO60675 156 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 ECEL1O95672 775 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 GOLGA6DP0CG33 693 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 GZMAP12544 262 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 TCF4P15884 667 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 LHCGRP22888 699 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 AK4P27144 223 aaPredicted RBP15.52■□□□□ 0.08
TRA2A-203ENST00000448549 HSPA9P38646 679 aaKnown RBP15.52■□□□□ 0.08
TRA2A-203ENST00000448549 ARL4AP40617 200 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 POLD2P49005 469 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 MAXP61244 160 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 TRAF2Q12933 501 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 NFATC3Q12968 1075 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 SMTNL2Q2TAL5 461 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 MANEAQ5SRI9 462 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 SLC30A9Q6PML9 568 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 ZNF574Q6ZN55 896 aaPredicted RBP15.52■□□□□ 0.08
TRA2A-203ENST00000448549 Q6ZVL8 140 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 HSPH1Q92598 858 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 DTD2Q96FN9 168 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 NUDT22Q9BRQ3 303 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 ARHGAP9Q9BRR9 750 aa15.52■□□□□ 0.08
TRA2A-203ENST00000448549 FRMD8Q9BZ67 464 aaPredicted RBP15.52■□□□□ 0.08
TRA2A-203ENST00000448549 TRNAU1APQ9NX07 287 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms