RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BTBD6Q96KE9 485 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 NUDCD1Q96RS6 583 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 STRADBQ9C0K7 418 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 COL6A6A6NMZ7 2263 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 PRSS38A1L453 326 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 MAFKO60675 156 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 SOCS5O75159 536 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 RARAP10276 462 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 GLB1P16278 677 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 SLC5A2P31639 672 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 VIPR1P32241 457 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 ZNF165P49910 485 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 C14orf28Q4W4Y0 310 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 BOLA3Q53S33 107 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 KIAA1614Q5VZ46 1190 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 SPECC1LQ69YQ0 1117 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 SNRNP27Q8WVK2 155 aaKnown RBP28.31■■■□□ 2.12
CBX4-202ENST00000448310 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.31■■■□□ 2.12
CBX4-202ENST00000448310 LRIT1Q9P2V4 623 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 APPL1Q9UKG1 709 aa28.31■■■□□ 2.12
CBX4-202ENST00000448310 TMX2-CTNND1H3BSU7 103 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 K7ENP7 123 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 HEXIM1O94992 359 aaKnown RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 MYCLP1P12525 358 aaPredicted RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 LHCGRP22888 699 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 CCKBRP32239 447 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 EIF3IQ13347 325 aaKnown RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 LY6DQ14210 128 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 HLTFQ14527 1009 aaKnown RBP eCLIP28.3■■■□□ 2.126e-7■□□□□ 8.6
CBX4-202ENST00000448310 TDRD12Q587J7 1177 aaKnown RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 INO80CQ6PI98 192 aaPredicted RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 HSD11B1LQ7Z5J1 315 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 SPRED1Q7Z699 444 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 HEATR4Q86WZ0 1026 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 ATPAF2Q8N5M1 289 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 SPOCK2Q92563 424 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 TTC9Q92623 222 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 TMEM74Q96NL1 305 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 MGME1Q9BQP7 344 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 SEMA4CQ9C0C4 833 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 CARS2Q9HA77 564 aaKnown RBP28.3■■■□□ 2.12
CBX4-202ENST00000448310 PISDQ9UG56 409 aa28.3■■■□□ 2.12
CBX4-202ENST00000448310 SERPINC1P01008 464 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 HSPA9P38646 679 aaKnown RBP28.29■■■□□ 2.12
CBX4-202ENST00000448310 ETV3P41162 512 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 NR1I3Q14994 352 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 CAVIN1Q6NZI2 390 aaKnown RBP28.29■■■□□ 2.12
CBX4-202ENST00000448310 CCDC81Q6ZN84 652 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 ZNF605Q86T29 641 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 PCDH18Q9HCL0 1135 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 PHPT1Q9NRX4 125 aaPredicted RBP28.29■■■□□ 2.12
CBX4-202ENST00000448310 SPATS2LQ9NUQ6 558 aaKnown RBP28.29■■■□□ 2.12
CBX4-202ENST00000448310 LOXL2Q9Y4K0 774 aa28.29■■■□□ 2.12
CBX4-202ENST00000448310 GOLGA6CA6NDK9 693 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 GOLGA6BA6NDN3 693 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 NPIPB15A6NHN6 443 aaPredicted RBP28.28■■■□□ 2.12
CBX4-202ENST00000448310 FUCA1P04066 466 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 GOLGA6DP0CG33 693 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 PLA2G2AP14555 144 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 MAZP56270 477 aaKnown RBP28.28■■■□□ 2.12
CBX4-202ENST00000448310 ARHGEF7Q14155 803 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 IQCB1Q15051 598 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 HGSNATQ68CP4 663 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 TMPRSS9Q7Z410 1059 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 TSPAN33Q86UF1 283 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 BBS5Q8N3I7 341 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 PTCD2Q8WV60 388 aaKnown RBP28.28■■■□□ 2.12
CBX4-202ENST00000448310 DTD2Q96FN9 168 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 TEX101Q9BY14 249 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 THAP2Q9H0W7 228 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 GOLGA6AQ9NYA3 693 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 PHTF1Q9UMS5 762 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 PCDHGA7Q9Y5G6 932 aa28.28■■■□□ 2.12
CBX4-202ENST00000448310 A0A0U1RQS6 177 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 A0A1W2PQ67 120 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 PDE2AO00408 941 aaPredicted RBP28.27■■■□□ 2.12
CBX4-202ENST00000448310 CEACAM5P06731 702 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 JMJD7P0C870 316 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 PNLIPP16233 465 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 CTPS1P17812 591 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 ITIH1P19827 911 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 MMP13P45452 471 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 SLC25A11Q02978 314 aaKnown RBP28.27■■■□□ 2.12
CBX4-202ENST00000448310 PIGHQ14442 188 aaPredicted RBP28.27■■■□□ 2.12
CBX4-202ENST00000448310 TGIF1Q15583 401 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 TSR1Q2NL82 804 aaKnown RBP28.27■■■□□ 2.12
CBX4-202ENST00000448310 Q6ZVL8 140 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 NRROSQ86YC3 692 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 NSMCE1Q8WV22 266 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 WBP1Q96G27 269 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 PIEZO2Q9H5I5 2752 aa28.27■■■□□ 2.12
CBX4-202ENST00000448310 PGLSO95336 258 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 CYP2A6P11509 494 aaPredicted RBP28.26■■■□□ 2.11
CBX4-202ENST00000448310 CCNB1P14635 433 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 GNPDA1P46926 289 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 CDK3Q00526 305 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 ZFP36L1Q07352 338 aaKnown RBP28.26■■■□□ 2.11
CBX4-202ENST00000448310 MARC1Q5VT66 337 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 RAET1GQ6H3X3 334 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 CBARPQ8N350 705 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms