RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CRCPO75575 148 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 GJB3O75712 270 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CNTN5O94779 1100 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ITGB1P05556 798 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 IMPDH1P20839 514 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 DNAJB1P25685 340 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 SLC7A1P30825 629 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ZNF33AQ06730 810 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PSMD5Q16401 504 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 FSCN1Q16658 493 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 TBCELQ5QJ74 424 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 RETREG3Q86VR2 466 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CILP2Q8IUL8 1156 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PCYOX1LQ8NBM8 494 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 TRPC4APQ8TEL6 797 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PSMG2Q969U7 264 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 RPL10LQ96L21 214 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 OSBPL11Q9BXB4 747 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 MYRFQ9Y2G1 1151 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ANKRD12Q6UB98 2062 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 UBA6A0AVT1 1052 aaPredicted RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 UBXN8O00124 270 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ANGPT2O15123 496 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 C8BP07358 591 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 LINC00032P0C843 101 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ATP6V1B2P21281 511 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 SLC5A2P31639 672 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 LEPRP48357 1165 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 RENBPP51606 427 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 UNC50Q53HI1 259 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 HMBOX1Q6NT76 420 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 KDELC1Q6UW63 502 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 USP50Q70EL3 339 aaPredicted RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 SCD5Q86SK9 330 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ISCA2Q86U28 154 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 MIB1Q86YT6 1006 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 FUNDC1Q8IVP5 155 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 CHERPQ8IWX8 916 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ZNF786Q8N393 782 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 OR13J1Q8NGT2 312 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PTERQ96BW5 349 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 RMND5BQ96G75 393 aaPredicted RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 DHRS1Q96LJ7 313 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 NSUN5Q96P11 429 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 PIF1Q9H611 641 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 SPATA7Q9P0W8 599 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 V9GYQ6 96 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 HAS3O00219 553 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 SOCS2O14508 198 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 TMCC1O94876 653 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 H6PDO95479 791 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 ALDOCP09972 364 aaKnown RBP12.92□□□□□ -0.34
SHC1-210ENST00000448116 GJA8P48165 433 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 FOXA1P55317 472 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 SH3BP2P78314 561 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 GRB7Q14451 532 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 SCIMPQ6UWF3 145 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 LPCAT2Q7L5N7 544 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 PLK2Q9NYY3 685 aa12.92□□□□□ -0.34
SHC1-210ENST00000448116 UNCXA6NJT0 531 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 PIP5K1BO14986 540 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 TRMUO75648 421 aaKnown RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 PRKCQQ04759 706 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 EFEMP1Q12805 493 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 APOFQ13790 326 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 DDR2Q16832 855 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 FUT11Q495W5 492 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ALFQ53S48 1182 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ACBD5Q5T8D3 534 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ZNF597Q96LX8 424 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 PARK7Q99497 189 aaKnown RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 RBM38Q9H0Z9 239 aaKnown RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 MYADML2A6NDP7 307 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 NCF1BA6NI72 391 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 NCF1CA8MVU1 366 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 TBX18O95935 607 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 S1PR4O95977 384 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 NCF1P14598 390 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 CD52P31358 61 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 MLLT6P55198 1093 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 C6orf10Q5SRN2 563 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 FAM171BQ6P995 826 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms