RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 HSD17B1P14061 328 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 RBL1P28749 1068 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 AXLP30530 894 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 STILQ15468 1287 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 SMU1Q2TAY7 513 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 KCNT1Q5JUK3 1230 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 TDRD10Q5VZ19 366 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 GK5Q6ZS86 529 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 THAP5Q7Z6K1 395 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 CMTR2Q8IYT2 770 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 PAPD5Q8NDF8 572 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ADAM32Q8TC27 787 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 HTRA1Q92743 480 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 RDH12Q96NR8 316 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ACTR3BQ9P1U1 418 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 FBXO40Q9UH90 709 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 STYXL1Q9Y6J8 313 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 LRRC37A2A6NM11 1700 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 CABYRO75952 493 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 VNN1O95497 513 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TAGLNQ01995 201 aaKnown RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SEMA5AQ13591 1074 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 CAPSQ13938 189 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 GALNT3Q14435 633 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 MAPK11Q15759 364 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 HSDL1Q3SXM5 330 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 PPM1JQ5JR12 505 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TAF2Q6P1X5 1199 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 ZYG11AQ6WRX3 759 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TBC1D21Q8IYX1 336 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 POC5Q8NA72 575 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 DYNC2LI1Q8TCX1 351 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 FIG4Q92562 907 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 HDAC10Q969S8 669 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SYTL2Q9HCH5 934 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TM9SF3Q9HD45 589 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 ATP13A2Q9NQ11 1180 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 POLE4Q9NR33 117 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 AURKCQ9UQB9 309 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 PCDHGB1Q9Y5G3 927 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SNX5Q9Y5X3 404 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TSPAN1O60635 241 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SEC24AO95486 1093 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 JUNP05412 331 aaKnown RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SNRPB2P08579 225 aaKnown RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 UMPSP11172 480 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 PGAM1P18669 254 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 TFE3P19532 575 aaPredicted RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 ADORA2AP29274 412 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 RFC2P35250 354 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 STAT5BP51692 787 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 CLCNKBP51801 687 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 AP2S1P53680 142 aaPredicted RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 MPP5Q8N3R9 675 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 FAM109AQ8N4B1 249 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SLC7A5P2Q9GIP4 190 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 DSN1Q9H410 356 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 NMRAL1Q9HBL8 299 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 MRM3Q9HC36 420 aaKnown RBP19.22■□□□□ 0.67
HMGA1-205ENST00000447654 SFMBT1Q9UHJ3 866 aa19.22■□□□□ 0.67
HMGA1-205ENST00000447654 AP3B1O00203 1094 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 MRASO14807 208 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 NDUFS2O75306 463 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 TSPAN9O75954 239 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 TRUB2O95900 331 aaKnown RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 CHRNGP07510 517 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 DNAJB1P25685 340 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 EPHX2P34913 555 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 SPRP35270 261 aaPredicted RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 DDOSTP39656 456 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ZNF135P52742 658 aaPredicted RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 TSPY1Q01534 308 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 SLC13A2Q13183 592 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ACOX1Q15067 660 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ZFP69Q49AA0 526 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ARL13AQ5H913 290 aaPredicted RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ATAD3CQ5T2N8 411 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 TNS4Q8IZW8 715 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 JPH3Q8WXH2 748 aaPredicted RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 HOPXQ9BPY8 73 aaPredicted RBP19.21■□□□□ 0.67
HMGA1-205ENST00000447654 TMEM246Q9BRR3 403 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 CALN1Q9BXU9 219 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 RHOBTB2Q9BYZ6 727 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 ABCD2Q9UBJ2 740 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 SIP14410 1827 aa19.21■□□□□ 0.67
HMGA1-205ENST00000447654 SNTNA6NMZ2 147 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 BBIP1A8MTZ0 92 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 K7ERI5 159 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 TMCC2O75069 709 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 MFN2O95140 757 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 RAD51Q06609 339 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 PLCL1Q15111 1095 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 FXNQ16595 210 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 BRMS1LQ5PSV4 323 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CATSPER4Q7RTX7 472 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ADGRG5Q8IZF4 528 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms