RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 IGHV5-10-1A0A0J9YXX1 117 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 DAPK3O43293 454 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 GPR3P46089 330 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 TRA2AQ13595 282 aaKnown RBP eCLIP24.4■■□□□ 1.5
PMS1-214ENST00000446877 PEX6Q13608 980 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 C17orf82Q86X59 251 aaPredicted RBP24.4■■□□□ 1.5
PMS1-214ENST00000446877 AGBL5Q8NDL9 886 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 CCDC74BQ96LY2 380 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 SLC12A9Q9BXP2 914 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 TRNAU1APQ9NX07 287 aaKnown RBP24.4■■□□□ 1.5
PMS1-214ENST00000446877 KCTD5Q9NXV2 234 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 TAAR2Q9P1P5 351 aa24.4■■□□□ 1.5
PMS1-214ENST00000446877 ECEL1O95672 775 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 FGF3P11487 239 aaPredicted RBP24.39■■□□□ 1.49
PMS1-214ENST00000446877 CD1CP29017 333 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 CSTF2P33240 577 aaKnown RBP eCLIP24.39■■□□□ 1.49
PMS1-214ENST00000446877 SCNN1BP51168 640 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 RPL7AP62424 266 aaKnown RBP24.39■■□□□ 1.49
PMS1-214ENST00000446877 RFTN1Q14699 578 aaPredicted RBP24.39■■□□□ 1.49
PMS1-214ENST00000446877 NR1D2Q14995 579 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 PTRH1Q86Y79 214 aaKnown RBP24.39■■□□□ 1.49
PMS1-214ENST00000446877 ZNF564Q8TBZ8 553 aaPredicted RBP24.39■■□□□ 1.49
PMS1-214ENST00000446877 NUS1Q96E22 293 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 CLSTN2Q9H4D0 955 aa24.39■■□□□ 1.49
PMS1-214ENST00000446877 EEF2KO00418 725 aaKnown RBP24.38■■□□□ 1.49
PMS1-214ENST00000446877 GNPDA1P46926 289 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 RENBPP51606 427 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 LIMK2P53671 638 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 AP1S1P61966 158 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 KCNAB2Q13303 367 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 CT47A1Q5JQC4 288 aaPredicted RBP24.38■■□□□ 1.49
PMS1-214ENST00000446877 SLC30A9Q6PML9 568 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 MON1BQ7L1V2 547 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 NRROSQ86YC3 692 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 PCMTD1Q96MG8 357 aaPredicted RBP24.38■■□□□ 1.49
PMS1-214ENST00000446877 ASPSCR1Q9BZE9 553 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 CDH19Q9H159 772 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 GPATCH2LQ9NWQ4 482 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 B4GALT6Q9UBX8 382 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 FLNCQ14315 2725 aa24.38■■□□□ 1.49
PMS1-214ENST00000446877 EIF3CLB5ME19 914 aaKnown RBP24.37■■□□□ 1.49
PMS1-214ENST00000446877 DFFAO00273 331 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 CEACAM5P06731 702 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 GM2AP17900 193 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 NFKBIAP25963 317 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 CCR10P46092 362 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 POLE2P56282 527 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 HEATR4Q86WZ0 1026 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 PELI3Q8N2H9 469 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 OR4D9Q8NGE8 314 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 ART4Q93070 314 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 COQ10AQ96MF6 247 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 EIF3CQ99613 913 aaKnown RBP24.37■■□□□ 1.49
PMS1-214ENST00000446877 DPYSL5Q9BPU6 564 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 DDA1Q9BW61 102 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 TEX101Q9BY14 249 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 DHX35Q9H5Z1 703 aaKnown RBP24.37■■□□□ 1.49
PMS1-214ENST00000446877 SLC39A1Q9NY26 324 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 AP4E1Q9UPM8 1137 aa24.37■■□□□ 1.49
PMS1-214ENST00000446877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.36■■□□□ 1.49
PMS1-214ENST00000446877 A0A1W2PQ67 120 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 TCRBV5S1A1TA0A578 114 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 TRAFD1O14545 582 aaPredicted RBP24.36■■□□□ 1.49
PMS1-214ENST00000446877 EPHB6O15197 1021 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 LIFP15018 202 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 AK4P27144 223 aaPredicted RBP24.36■■□□□ 1.49
PMS1-214ENST00000446877 UGT1A3P35503 534 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 IL10RBQ08334 325 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 NKAIN2Q5VXU1 208 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 DENND2CQ68D51 928 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 CACNA2D3Q8IZS8 1091 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 ZMYND15Q9H091 742 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 TUBD1Q9UJT1 453 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 SUFUQ9UMX1 484 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 B3GALT1Q9Y5Z6 326 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 SCN8AQ9UQD0 1980 aa24.36■■□□□ 1.49
PMS1-214ENST00000446877 GOLGA6CA6NDK9 693 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 GOLGA6BA6NDN3 693 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 CAPN5O15484 640 aaPredicted RBP24.35■■□□□ 1.49
PMS1-214ENST00000446877 GOLGA6DP0CG33 693 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 PPM1FP49593 454 aaPredicted RBP24.35■■□□□ 1.49
PMS1-214ENST00000446877 PDCD6IPQ8WUM4 868 aaKnown RBP24.35■■□□□ 1.49
PMS1-214ENST00000446877 PMEPA1Q969W9 287 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 CATSPER2Q96P56 530 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 PSKH2Q96QS6 385 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 AGPAT1Q99943 283 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 FRMD8Q9BZ67 464 aaPredicted RBP24.35■■□□□ 1.49
PMS1-214ENST00000446877 GOLGA6AQ9NYA3 693 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 KCNK4Q9NYG8 393 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 LRP4O75096 1905 aa24.35■■□□□ 1.49
PMS1-214ENST00000446877 ZNF891A8MT65 544 aaPredicted RBP24.34■■□□□ 1.49
PMS1-214ENST00000446877 FUCA1P04066 466 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 MPSTP25325 297 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 ARSDP51689 593 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 CTBSQ01459 385 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 SQSTM1Q13501 440 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 KRT31Q15323 416 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 CNGA3Q16281 694 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 PPP1R15BQ5SWA1 713 aa24.34■■□□□ 1.49
PMS1-214ENST00000446877 DCAF12Q5T6F0 453 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms