RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PEX1O43933 1283 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 ADRB2P07550 413 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 SNRPB2P08579 225 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 MMP8P22894 467 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 TGFBR2P37173 567 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 GSTM5P46439 218 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 PRR5P85299 388 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 KLHL26Q53HC5 615 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 OR52K1Q8NGK4 314 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 IRF7Q92985 503 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 MCIDASD6RGH6 385 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 NPC1O15118 1278 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 SLC6A2P23975 617 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 UGT2B15P54855 530 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 WDR45BQ5MNZ6 344 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 GPR180Q86V85 440 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 MIOSQ9NXC5 875 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 NUDT4Q9NZJ9 180 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 hCG_1818297A0A087WSY0 165 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 HLA-DQA2P01906 255 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 SPATA31C1P0DKV0 1188 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 NR2C1P13056 603 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 FEN1P39748 380 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 C2CD6Q53TS8 623 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 UBE2R2Q712K3 238 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 PIWIL2Q8TC59 973 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 UTP15Q8TED0 518 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 ARNTL2Q8WYA1 636 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 PPCDCQ96CD2 204 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 GBA3Q9H227 469 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 FAM83DQ9H4H8 585 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 SLC38A8A6NNN8 435 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 PMM2O15305 246 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 MED26O95402 600 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 NQO1P15559 274 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 DPP6P42658 865 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 PRKCZQ05513 592 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 MARK2Q7KZI7 788 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 NTPCRQ9BSD7 190 aaKnown RBP8.55□□□□□ -1.04
PTPN3-204ENST00000446349 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 CFL2Q9Y281 166 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
PTPN3-204ENST00000446349 BGNP21810 368 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 SSR2P43308 183 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 AHI1Q8N157 1196 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 SLC4A11Q8NBS3 891 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TEKT5Q96M29 485 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 MAGEB3O15480 346 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 PI15O43692 258 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 AGR2O95994 175 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 HNRNPH3P31942 346 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 WNT3AP56704 352 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CRHR2Q13324 411 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 KRT74Q7RTS7 529 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 ECHDC2Q86YB7 292 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CEP295NLQ96MC4 621 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TRMT61BQ9BVS5 477 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 HMG20AQ9NP66 347 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 DNAJC11Q9NVH1 559 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 INTS10Q9NVR2 710 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FBXO5Q9UKT4 447 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF142P52746 1687 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FAM20BO75063 409 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 GOT1P17174 413 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 SMPD1P17405 629 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 EPORP19235 508 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 NSG1P42857 185 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CRATP43155 626 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 MBTD1Q05BQ5 628 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RCN1Q15293 331 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FAM153CQ494X1 144 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 LRRC34Q8IZ02 419 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 COL26A1Q96A83 441 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 ART5Q96L15 291 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 AGO3Q9H9G7 860 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FBRSQ9HAH7 460 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 VWA7Q9Y334 891 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 MYO9BQ13459 2157 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 KLHL33A6NCF5 533 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TPP1O14773 563 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 OR6B1O95007 311 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TNFP01375 233 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TFEBP19484 476 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 IL5RAQ01344 420 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 BRAT1Q6PJG6 821 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RORBQ92753 470 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 ALG9Q9H6U8 611 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms