RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 ZFC3H1O60293 1989 aaKnown RBP13.83□□□□□ -0.2
PTPRE-203ENST00000442830 TMEM191CA6NGB0 347 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 RHPN2P1A8MT19 583 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.82□□□□□ -0.2
PTPRE-203ENST00000442830 CPP00450 1065 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 MIPP30301 263 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 RGRP47804 291 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 OGDHQ02218 1023 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 NR1D2Q14995 579 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 FILIP1LQ4L180 1135 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 USP45Q70EL2 814 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 ZNF438Q7Z4V0 828 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 IRF2BP2Q7Z5L9 587 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 SLITRK4Q8IW52 837 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 Q8N9G6 341 aaPredicted RBP13.82□□□□□ -0.2
PTPRE-203ENST00000442830 NETO2Q8NC67 525 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 NUDCD1Q96RS6 583 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 KCTD15Q96SI1 283 aaPredicted RBP13.82□□□□□ -0.2
PTPRE-203ENST00000442830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPRE-203ENST00000442830 TEX101Q9BY14 249 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 TMEM168Q9H0V1 697 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 CDH19Q9H159 772 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 CLMPQ9H6B4 373 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 GPATCH2LQ9NWQ4 482 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 PCSK1NQ9UHG2 260 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 RNF215Q9Y6U7 377 aa13.82□□□□□ -0.2
PTPRE-203ENST00000442830 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 ATP1A2P50993 1020 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 CDH6P55285 790 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 DPYSQ14117 519 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 ASIC2Q16515 512 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 DPYSL2Q16555 572 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 PHF19Q5T6S3 580 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 C17orf82Q86X59 251 aaPredicted RBP13.81□□□□□ -0.2
PTPRE-203ENST00000442830 RAVER1Q8IY67 606 aaKnown RBP13.81□□□□□ -0.2
PTPRE-203ENST00000442830 ZDHHC1Q8WTX9 485 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 DTD2Q96FN9 168 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 SYT11Q9BT88 431 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 CARS2Q9HA77 564 aaKnown RBP13.81□□□□□ -0.2
PTPRE-203ENST00000442830 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
PTPRE-203ENST00000442830 PMS2P1A4D2B8 440 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 STMND1H3BQB6 276 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 TEX33O43247 280 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 EFSO43281 561 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 SLC28A2O43868 658 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 LRCH4O75427 683 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 HEXIM1O94992 359 aaKnown RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 MBD3O95983 291 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 PRKCGP05129 697 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 IVLP07476 585 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 CA4P22748 312 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 PRKCIP41743 596 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 KCNC4Q03721 635 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 DPTQ07507 201 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 TCEA2Q15560 299 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 CNGA3Q16281 694 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 CA9Q16790 459 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 HEATR4Q86WZ0 1026 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 ATPAF2Q8N5M1 289 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 NPWQ8N729 165 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 FRMD8Q9BZ67 464 aaPredicted RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 SEMA4CQ9C0C4 833 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 MRPL40Q9NQ50 206 aaKnown RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 AIPL1Q9NZN9 384 aa13.8□□□□□ -0.2
PTPRE-203ENST00000442830 CWC15Q9P013 229 aaKnown RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 TLN1Q9Y490 2541 aaKnown RBP13.8□□□□□ -0.2
PTPRE-203ENST00000442830 TENM4Q6N022 2769 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PRAMEF33A0A0G2JMD5 474 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 SMTNL1A8MU46 457 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 TMCO5BA8MYB1 307 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PRAMEF10O60809 474 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 FTLP02792 175 aaPredicted RBP13.79□□□□□ -0.2
PTPRE-203ENST00000442830 ZNF30P17039 623 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 CR2P20023 1033 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 CES1P23141 567 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 MAN1A1P33908 653 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 GPLD1P80108 840 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 CDK3Q00526 305 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 B4GALNT1Q00973 533 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 SQSTM1Q13501 440 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PIGHQ14442 188 aaPredicted RBP13.79□□□□□ -0.2
PTPRE-203ENST00000442830 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 ARMC12Q5T9G4 340 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 RAET1GQ6H3X3 334 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms