RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CYP7B1O75881 506 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 FADS2O95864 444 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TNNC2P02585 160 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 NMBRP28336 390 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 LIMK2P53671 638 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CTAG1AP78358 180 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PTPN11Q06124 597 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 POU6F1Q14863 301 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CCDC14Q49A88 953 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PYCR3Q53H96 274 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 GRTP1Q5TC63 336 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PRR5LQ6MZQ0 368 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TRAF7Q6Q0C0 670 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 B3GNT9Q6UX72 402 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 KIAA0408Q6ZU52 694 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TMEM192Q8IY95 271 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 MICU2Q8IYU8 434 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CADM2Q8N3J6 435 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 KDM1BQ8NB78 822 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 OR7G1Q8NGA0 311 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 APBB2Q92870 758 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 P2RY11Q96G91 374 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 GAD1Q99259 594 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 FTHL17Q9BXU8 183 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 HOXD1Q9GZZ0 328 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ABCG4Q9H172 646 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 DTLQ9NZJ0 730 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 VANGL2Q9ULK5 521 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TOGARAM1Q9Y4F4 1720 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 NAV1Q8NEY1 1877 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 A0A0J9YYE9 177 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 MED7O43513 233 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 MGEA5O60502 916 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 FARP2O94887 1054 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 LRIG2O94898 1065 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CD4P01730 458 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ITGB3P05106 788 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PSAPP07602 524 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 BMP2P12643 396 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 KCNA5P22460 613 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PRKACBP22694 351 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 FMO3P31513 532 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 IL5RAQ01344 420 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 NFYCQ13952 458 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 NDUFA5Q16718 116 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TMTC4Q5T4D3 741 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ZYG11AQ6WRX3 759 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CYP4V2Q6ZWL3 525 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 GALNT5Q7Z7M9 940 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SPARTQ8N0X7 666 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 UBE2J2Q8N2K1 259 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CCDC185Q8N715 623 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 DCBLD1Q8N8Z6 715 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TERB1Q8NA31 727 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 FBXO30Q8TB52 745 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CNIH3Q8TBE1 160 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 RDH11Q8TC12 318 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ADAMTS16Q8TE57 1224 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 NUDT8Q8WV74 236 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 BIRC7Q96CA5 298 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 WDR12Q9GZL7 423 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 C2orf40Q9H1Z8 148 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SCUBE2Q9NQ36 999 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TSR3Q9UJK0 312 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PCDHGA11Q9Y5H2 935 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SHANK3Q9BYB0 1731 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 BCLAF3A2AJT9 711 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 GPR25O00155 361 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 AP3D1O14617 1153 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TRIM24O15164 1050 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 HOXC11O43248 304 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 GSNP06396 782 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ALOX5P09917 674 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CXCL8P10145 99 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TGM1P22735 817 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 CXCR2P25025 360 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TMBIM6P55061 237 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TGFB2P61812 414 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SNRPFP62306 86 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SYT16Q17RD7 645 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 TXNDC11Q6PKC3 985 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 LILRB2Q8N423 598 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SPPL2BQ8TCT7 592 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PAWRQ96IZ0 340 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 RHNO1Q9BSD3 238 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ST6GALNAC4Q9H4F1 302 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ALG2Q9H553 416 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 SLC38A10Q9HBR0 1119 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 PTBP2Q9UKA9 531 aaKnown RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 ZNFX1Q9P2E3 1918 aaKnown RBP7.53□□□□□ -1.2
HDAC9-214ENST00000441542 SCN7AQ01118 1682 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms