RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 TMEFF1Q8IYR6 380 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 STK40Q8N2I9 435 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 MPP5Q8N3R9 675 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 LPCAT1Q8NF37 534 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 GABPB2Q8TAK5 448 aaPredicted RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 FRS2Q8WU20 508 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 OR8D1Q8WZ84 308 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ZNF669Q96BR6 464 aaPredicted RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 TOE1Q96GM8 510 aaKnown RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 RANBP9Q96S59 729 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ROPN1BQ9BZX4 212 aaPredicted RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ARRDC1-AS1Q9H2J1 176 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 EPB41L4BQ9H329 900 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ZDHHC6Q9H6R6 413 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ROPN1Q9HAT0 212 aaPredicted RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 CD93Q9NPY3 652 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 WSB2Q9NYS7 404 aaPredicted RBP16.09■□□□□ 0.17
UBE2F-214ENST00000440223 HACD3Q9P035 362 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 CHKBQ9Y259 395 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 OTOGLQ3ZCN5 2332 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 DMDP11532 3685 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
UBE2F-214ENST00000440223 SASH3O75995 380 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 USP1O94782 785 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 ATXN1LP0C7T5 689 aaKnown RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 TPH1P17752 444 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 SSTR1P30872 391 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CHRNA4P43681 627 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 GRIA4P48058 902 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CCNHP51946 323 aaPredicted RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 TRAF2Q12933 501 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 GALNT3Q14435 633 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 POU6F1Q14863 301 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CST6Q15828 149 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CSRP2Q16527 193 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CERCAMQ5T4B2 595 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 DENND5AQ6IQ26 1287 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 UNC5AQ6ZN44 842 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 Q6ZVU0 165 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 USP30Q70CQ3 517 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 KIAA2013Q8IYS2 634 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CNPY4Q8N129 248 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 GANCQ8TET4 914 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CDKL2Q92772 493 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 FOXJ1Q92949 421 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 LRIG1Q96JA1 1093 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 CYTH2Q99418 400 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 HEPHQ9BQS7 1158 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 OSBPL1AQ9BXW6 950 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 STMN4Q9H169 189 aaPredicted RBP16.08■□□□□ 0.16
UBE2F-214ENST00000440223 SEMA4GQ9NTN9 838 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 TCAF1Q9Y4C2 921 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 PCDHGC4Q9Y5F7 938 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 IKBKGQ9Y6K9 419 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 RPS6KL1Q9Y6S9 549 aa16.08■□□□□ 0.16
UBE2F-214ENST00000440223 FAM186AA6NE01 2351 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 C1QTNF3-AMACRE9PGA6 284 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 GJB3O75712 270 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 PGLSO95336 258 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 CRTAMO95727 393 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 IL1BP01584 269 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 MYZAPP0CAP1 466 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 C5AR1P21730 350 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 PSMD8P48556 350 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 GPX6P59796 221 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 CRADDP78560 199 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 PDE1BQ01064 536 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 NAB1Q13506 487 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 CRYMQ14894 314 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 FAM46CQ5VWP2 391 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 ARMCX6Q7L4S7 300 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 FAM124AQ86V42 546 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 IGDCC3Q8IVU1 814 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 RIBC1Q8N443 379 aaPredicted RBP16.07■□□□□ 0.16
UBE2F-214ENST00000440223 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE2F-214ENST00000440223 OR6K2Q8NGY2 324 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 BLOC1S5Q8TDH9 187 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 FBF1Q8TES7 1133 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 HSPA12BQ96MM6 686 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 TRIB3Q96RU7 358 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 KIFC1Q9BW19 673 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 PCED1AQ9H1Q7 454 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 ACSS3Q9H6R3 686 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 MED4Q9NPJ6 270 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 FETUBQ9UGM5 382 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 SCN8AQ9UQD0 1980 aa16.07■□□□□ 0.16
UBE2F-214ENST00000440223 ZNF106Q9H2Y7 1883 aaKnown RBP16.06■□□□□ 0.16
UBE2F-214ENST00000440223 MEI4A8MW99 385 aa16.06■□□□□ 0.16
UBE2F-214ENST00000440223 RASGRF2O14827 1237 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms