RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NET1Q7Z628 596 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 LINC00523Q86TU6 105 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM72BQ86X60 149 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TMPRSS6Q8IU80 811 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CRLF3Q8IUI8 442 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC185Q8N715 623 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 HDAC11Q96DB2 347 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CELF6Q96J87 481 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PRICKLE1Q96MT3 831 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM118BQ9BPY3 351 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GTPBP2Q9BX10 602 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RETREG1Q9H6L5 497 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KCNK13Q9HB14 408 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CD248Q9HCU0 757 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NDFIP2Q9NV92 336 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DNAJC28Q9NX36 388 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CLIC5Q9NZA1 410 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF212Q9UDV6 495 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD11Q6UB99 2663 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 THADAQ6YHU6 1953 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GOLGA8QA0A0J9YX86 632 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM92AA1XBS5 289 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TTC24A2A3L6 582 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DCDC2BA2VCK2 349 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GOLGA8OA6NCC3 632 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 A8MX80 341 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TTC34A8MYJ7 566 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TRIM49D1C9J1S8 452 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GOLGA8NF8WBI6 632 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SLCO1B7G3V0H7 640 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SCAMP1O15126 338 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZBTB24O43167 697 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CACNG3O60359 315 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ACSL4O60488 711 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GREM1O60565 184 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RPP40O75818 363 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 USP1O94782 785 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OLFM2O95897 454 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 POLBP06746 335 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DRD1P21728 446 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CCR1P32246 355 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINB5P36952 375 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ETFBP38117 255 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GRIA2P42262 883 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PSEN1P49768 467 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 XIAPP98170 497 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RPL6Q02878 288 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PPIDQ08752 370 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ASPHQ12797 758 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC32Q14392 662 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF234Q14588 700 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TRMT5Q32P41 509 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ARL13BQ3SXY8 428 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD20A2Q5SQ80 823 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 C6orf163Q5TEZ5 329 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAXCQ5TGI0 409 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD20A1Q5TYW2 823 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RNF219Q5W0B1 726 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 IL31Q6EBC2 164 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM47EQ6ZV65 393 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 HTR3DQ70Z44 454 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 BMP8AQ7Z5Y6 402 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GALNT7Q86SF2 657 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MMAAQ8IVH4 418 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 WDR75Q8IWA0 830 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ARHGAP18Q8N392 663 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 LZTR1Q8N653 840 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OR7D4Q8NG98 312 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 AGAP11Q8TF27 550 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OXNAD1Q96HP4 312 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SERAC1Q96JX3 654 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINB11Q96P15 392 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KCTD15Q96SI1 283 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NELL2Q99435 816 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PAIP2Q9BPZ3 127 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TBC1D10AQ9BXI6 508 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OSBPL6Q9BZF3 934 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CHRDQ9H2X0 955 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC40Q9H9A6 602 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DONSONQ9NYP3 566 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PRRC2CQ9Y520 2896 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TDRD6O60522 2096 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 DENND4CQ5VZ89 1909 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 FAM237BA0A1B0GVD1 139 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CAPN14A8MX76 684 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 KCNU1A8MYU2 1149 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 IRAK2O43187 625 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TIMM44O43615 452 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PEX11AO75192 247 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 FKBP6O75344 327 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ANP32DO95626 131 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PYGBP11216 843 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms