RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 VASH2Q86V25 355 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-207ENST00000439445 ZFAND4Q86XD8 727 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 SFTPA2Q8IWL1 248 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 ZSCAN1Q8NBB4 408 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 TSEN2Q8NCE0 465 aaKnown RBP9.87□□□□□ -0.83
CCDC66-207ENST00000439445 USP7Q93009 1102 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 TMEM159Q96B96 161 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 CELF6Q96J87 481 aaKnown RBP9.87□□□□□ -0.83
CCDC66-207ENST00000439445 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-207ENST00000439445 MCEEQ96PE7 176 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 TUBGCP5Q96RT8 1024 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 CMKLR1Q99788 373 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 CNPY3Q9BT09 278 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 TRIM4Q9C037 500 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 TMEM168Q9H0V1 697 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 ATP13A3Q9H7F0 1226 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 CYP4F12Q9HCS2 524 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
CCDC66-207ENST00000439445 UTP20O75691 2785 aaKnown RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 ARHGAP42A6NI28 874 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 TNFRSF10CO14798 259 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 ARHGAP6O43182 974 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 TEX33O43247 280 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 ELFN1P0C7U0 828 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 FAM87AP0C7U9 286 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 PNLIPP16233 465 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 DESP17661 470 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 RGRP47804 291 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 CSNK1DP48730 415 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 CSRP3P50461 194 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 PAPOLAP51003 745 aaKnown RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 AIF1P55008 147 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 GSCP56915 257 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 KIAA1024LP59773 190 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 NFKB2Q00653 900 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 HLTFQ14527 1009 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 ACOX1Q15067 660 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 KRT31Q15323 416 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 MAP9Q49MG5 647 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 CT47A1Q5JQC4 288 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 TMEM164Q5U3C3 297 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 SPECC1LQ69YQ0 1117 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 LIPIQ6XZB0 460 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 MON1BQ7L1V2 547 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 TMPRSS9Q7Z410 1059 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 PIM3Q86V86 326 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 CCL4L1Q8NHW4 92 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 LGR4Q9BXB1 951 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 SLC39A8Q9C0K1 460 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 NUP62CLQ9H1M0 184 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 SEMA6CQ9H3T2 930 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 LRRC19Q9H756 370 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 SUDS3Q9H7L9 328 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 PDFQ9HBH1 243 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 RDH14Q9HBH5 336 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 GPATCH2LQ9NWQ4 482 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 AKAP7Q9P0M2 348 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-207ENST00000439445 IL17BQ9UHF5 180 aa9.86□□□□□ -0.83
CCDC66-207ENST00000439445 NBASA2RRP1 2371 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 A0A1W2PQC6 194 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 TCRBV5S1A1TA0A578 114 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 PDE2AO00408 941 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 EEF2KO00418 725 aaKnown RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 DAPK3O43293 454 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 B4GAT1O43505 415 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 NUDT21O43809 227 aaKnown RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 CPNE6O95741 557 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 HOXC4P09017 264 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 SFTPCP11686 197 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 ALDH4A1P30038 563 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 HTR7P34969 479 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 TRIM23P36406 574 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 SCNN1BP51168 640 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 OR1D5P58170 312 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 CYP4F2P78329 520 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 B4GALNT1Q00973 533 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 NSUN2Q08J23 767 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 RALGDSQ12967 914 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 TBR1Q16650 682 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 AMZ1Q400G9 498 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 AFMIDQ63HM1 303 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 PNCKQ6P2M8 343 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 ATG14Q6ZNE5 492 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 SLITRK4Q8IW52 837 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 NEK11Q8NG66 645 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 ENOX1Q8TC92 643 aaKnown RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 KIAA1524Q8TCG1 905 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 JPH3Q8WXH2 748 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 AGPAT1Q99943 283 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 CINPQ9BW66 212 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 DHX35Q9H5Z1 703 aaKnown RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 WDR26Q9H7D7 661 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 STARD5Q9NSY2 213 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 SPATS2LQ9NUQ6 558 aaKnown RBP9.85□□□□□ -0.83
CCDC66-207ENST00000439445 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 SIK3Q9Y2K2 1263 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
CCDC66-207ENST00000439445 PRRC2CQ9Y520 2896 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms