RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CATSPERZQ9NTU4 200 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 COPG2Q9UBF2 871 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 ZMYM5Q9UJ78 669 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 RIMKLBQ9ULI2 386 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 KLF11O14901 512 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 CDKN1CP49918 316 aaPredicted RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 DHCR24Q15392 516 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 TAF1BQ53T94 588 aaPredicted RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 C22orf39Q6P5X5 142 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 ZSWIM9Q86XI8 627 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 TTC30BQ8N4P2 665 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 GBP7Q8N8V2 638 aaPredicted RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 GABPB2Q8TAK5 448 aaPredicted RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 FGF13Q92913 245 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 DUS2Q9NX74 493 aaKnown RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 FKBPLQ9UIM3 349 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 ECT2LQ008S8 904 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 DLG1Q12959 904 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 GEN1Q17RS7 908 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 MBLAC2Q68D91 279 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 LYSMD3Q7Z3D4 306 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 MAGEC3Q8TD91 643 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 OTUB2Q96DC9 234 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 NMRAL1Q9HBL8 299 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 HECAQ9UBI9 543 aaPredicted RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 SLC25A13Q9UJS0 675 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 RUVBL2Q9Y230 463 aaKnown RBP21.13■□□□□ 0.97
PTPRF-207ENST00000436724 ACOT9Q9Y305 439 aa21.13■□□□□ 0.97
PTPRF-207ENST00000436724 NUP210Q8TEM1 1887 aaPredicted RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 TK2O00142 265 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 LINC01565O15544 149 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CYP17A1P05093 508 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 FGF3P11487 239 aaPredicted RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 SLC12A2P55011 1212 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 KCNJ2P63252 427 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 POU4F1Q01851 419 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CCDC153Q494R4 210 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 MRNIPQ6NTE8 343 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 GET4Q7L5D6 327 aaPredicted RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CYB5D2Q8WUJ1 264 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 NXNL1Q96CM4 212 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 ABHD8Q96I13 439 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 GDF15Q99988 308 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 KLHL14Q9P2G3 628 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 DCTN4Q9UJW0 460 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 ZNF711Q9Y462 761 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 GPR39O43194 453 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 HTRA2O43464 458 aaPredicted RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 ATP6V1G2O95670 118 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CPA3P15088 417 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 NQO1P15559 274 aaKnown RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 GRIA4P48058 902 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CSNK1DP48730 415 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CLCN5P51795 746 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 CDKN2DP55273 166 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 HECTD2Q5U5R9 776 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 Q6ZVU0 165 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 METTL3Q86U44 580 aaKnown RBP21.12■□□□□ 0.97
PTPRF-207ENST00000436724 LMNTD2Q8IXW0 634 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 GPR150Q8NGU9 434 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 RFWD2Q8NHY2 731 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 LMAN2LQ9H0V9 348 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 FAM96AQ9H5X1 160 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 ATP13A3Q9H7F0 1226 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 MARK1Q9P0L2 795 aa21.12■□□□□ 0.97
PTPRF-207ENST00000436724 A8MX80 341 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 SLC9A3R1O14745 358 aaPredicted RBP21.11■□□□□ 0.97
PTPRF-207ENST00000436724 STX7O15400 261 aaKnown RBP21.11■□□□□ 0.97
PTPRF-207ENST00000436724 FSHRP23945 695 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 POLD2P49005 469 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 SNRPD1P62314 119 aaKnown RBP21.11■□□□□ 0.97
PTPRF-207ENST00000436724 SEMG2Q02383 582 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 EML3Q32P44 896 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 ATG16L1Q676U5 607 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 ZNF549Q6P9A3 640 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 DPY19L3Q6ZPD9 716 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 GALNT7Q86SF2 657 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 C12orf40Q86WS4 652 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 TMEM151AQ8N4L1 468 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 PPP1R14CQ8TAE6 165 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 ASB16Q96NS5 453 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 ANKRD6Q9Y2G4 727 aa21.11■□□□□ 0.97
PTPRF-207ENST00000436724 G3V2L1 256 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 SBK3P0C264 359 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 ARSAP15289 507 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 CRABP2P29373 138 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 PMLP29590 882 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 CCNHP51946 323 aaPredicted RBP21.1■□□□□ 0.97
PTPRF-207ENST00000436724 STC1P52823 247 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 MESP2Q0VG99 397 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 MYLK3Q32MK0 819 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 ATG14Q6ZNE5 492 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 PIM3Q86V86 326 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 TRIM42Q8IWZ5 723 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 PIANPQ8IYJ0 282 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 OSCP1Q8WVF1 389 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 FAM136AQ96C01 138 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 GPR63Q9BZJ6 419 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 EBF3Q9H4W6 596 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms