RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PREPLQ4J6C6 727 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 FNDC3BQ53EP0 1204 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC44A4Q53GD3 710 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 TMEM196Q5HYL7 178 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SIRPB2Q5JXA9 342 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CERCAMQ5T4B2 595 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 C9orf64Q5T6V5 341 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 EGFLAMQ63HQ2 1017 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 LINC00523Q86TU6 105 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SUGP1Q8IWZ8 645 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ZBED8Q8IZ13 594 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 RYBPQ8N488 228 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 MREGQ8N565 214 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC25A41Q8N5S1 370 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ZNF366Q8N895 744 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 C9orf72Q96LT7 481 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 FSD1LQ9BXM9 530 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CDC42EP4Q9H3Q1 356 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ARFGAP3Q9NP61 516 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ZDHHC4Q9NPG8 344 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ARGLU1Q9NWB6 273 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SYBUQ9NX95 663 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 GOLGA6AQ9NYA3 693 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 NINJ2Q9NZG7 142 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 THEGQ9P2T0 379 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CHKBQ9Y259 395 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 TEX264Q9Y6I9 313 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 COL4A3Q01955 1670 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 TRIOBPQ9H2D6 2365 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 NYNRINQ9P2P1 1898 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 AP3B1O00203 1094 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PGLSO95336 258 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 TTC4O95801 387 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 NDST3O95803 873 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CTSLP07711 333 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC8A1P32418 973 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 TNNT3P45378 269 aaPredicted RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 GPX6P59796 221 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 BCL2L1Q07817 233 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CDH17Q12864 832 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 GALNT3Q14435 633 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CASP8Q14790 479 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PTPRRQ15256 657 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CCDC38Q502W7 563 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 DENND2CQ68D51 928 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SERPINA13PQ6UXR4 307 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CEP128Q6ZU80 1094 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 TRMT10CQ7L0Y3 403 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SYT9Q86SS6 491 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 ZSWIM9Q86XI8 627 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 DNAAF3Q8N9W5 541 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 FBXO36Q8NEA4 188 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 OR6P1Q8NGX9 317 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 UCMAQ8WVF2 138 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PIH1D2Q8WWB5 315 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 FAM3CQ92520 227 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 ECHDC3Q96DC8 303 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 LRRC39Q96DD0 335 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 STAMBPL1Q96FJ0 436 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SHDQ96IW2 340 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 ZNF641Q96N77 438 aaPredicted RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SMIM14Q96QK8 99 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 EBNA1BP2Q99848 306 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 HEPHQ9BQS7 1158 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 FUT8Q9BYC5 575 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CPEB1Q9BZB8 566 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PABPC3Q9H361 631 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 PRSS16Q9NQE7 514 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CHRAC1Q9NRG0 131 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CACNA2D2Q9NY47 1150 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 DUSP12Q9UNI6 340 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC8A2Q9UPR5 921 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 CHMP2BQ9UQN3 213 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 SPO11Q9Y5K1 396 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 STON1Q9Y6Q2 735 aa7.07□□□□□ -1.28
LSM3P3-201ENST00000436601 EDDM13A0A1B0GTR0 161 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 MAGEB16A2A368 324 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 FAM221AA4D161 298 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 ANKRD66B4E2M5 251 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 RIPK2O43353 540 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 SOCS5O75159 536 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 LEFTY1O75610 366 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 ACSL3O95573 720 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 CPP00450 1065 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 PRKCGP05129 697 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 FGF1P05230 155 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 IMPDH2P12268 514 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 ALADP13716 330 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 HLA-DPA1P20036 260 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 DRD1P21728 446 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 CD72P21854 359 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 HSD3B2P26439 372 aa7.06□□□□□ -1.28
LSM3P3-201ENST00000436601 SERPINA4P29622 427 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms