RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CTPS1P17812 591 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 LPOP22079 712 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-206ENST00000431390 ARNTP27540 789 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 ABL2P42684 1182 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 ID4P47928 161 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 SERPINB9P50453 376 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 ELAVL3Q14576 367 aaKnown RBP18.26■□□□□ 0.51
HMGN1-206ENST00000431390 TMED2Q15363 201 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 HSP90AA5PQ58FG0 334 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 ARSIQ5FYB1 569 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 TXNDC11Q6PKC3 985 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 USP45Q70EL2 814 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 CNTN4Q8IWV2 1026 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 TTC30BQ8N4P2 665 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 TMIEQ8NEW7 156 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 CALML6Q8TD86 181 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 KCNV2Q8TDN2 545 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 SCRN2Q96FV2 425 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 MCCC1Q96RQ3 725 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-206ENST00000431390 CPNE1Q99829 537 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 SLC2A4RGQ9NR83 387 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 HEBP1Q9NRV9 189 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 IL1RAPL1Q9NZN1 696 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 TBK1Q9UHD2 729 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 KCTD3Q9Y597 815 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 IQANK1A0A1B0GTG1 560 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 AURKAO14965 403 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 RPP40O75818 363 aaKnown RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 ALPIP09923 528 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 NFKBIAP25963 317 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 CNTFP26441 200 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 KIR2DL1P43626 348 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 ZNF805Q5CZA5 627 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 TMEM196Q5HYL7 178 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 LGSNQ5TDP6 509 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 KCTD16Q68DU8 428 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 TAOK1Q7L7X3 1001 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 LMNTD2Q8IXW0 634 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 STK40Q8N2I9 435 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 ZNF513Q8N8E2 541 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 DTWD2Q8NBA8 298 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 DNAJC1Q96KC8 554 aaKnown RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 SMIM14Q96QK8 99 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 FAM167BQ9BTA0 163 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 STON1Q9Y6Q2 735 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 CKAP5Q14008 2032 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 SRFP11831 508 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 DRD1P21728 446 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 HNF1BP35680 557 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 HMGCLP35914 325 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 GP5P40197 560 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 PRAMEP78395 509 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 THOC5Q13769 683 aaKnown RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 TPRG1Q6ZUI0 275 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 ERMP1Q7Z2K6 904 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 DSG4Q86SJ6 1040 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 CYP4X1Q8N118 509 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 OR13C4Q8NGS5 318 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 EZH1Q92800 747 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 GPR63Q9BZJ6 419 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
HMGN1-206ENST00000431390 CACNA2D2Q9NY47 1150 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 ACTL7BQ9Y614 415 aa18.25■□□□□ 0.51
HMGN1-206ENST00000431390 SCN8AQ9UQD0 1980 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 UGT1A9O60656 530 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 KRT37O76014 449 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 KRT38O76015 456 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 EPHX1P07099 455 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 HADHAP40939 763 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 ARSDP51689 593 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 CSE1LP55060 971 aaKnown RBP18.24■□□□□ 0.51
HMGN1-206ENST00000431390 MAGOHP61326 146 aaKnown RBP18.24■□□□□ 0.51
HMGN1-206ENST00000431390 GRSF1Q12849 480 aaKnown RBP eCLIP18.24■□□□□ 0.51
HMGN1-206ENST00000431390 PON2Q15165 354 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 CDKN3Q16667 212 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 UGP2Q16851 508 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 GRTP1Q5TC63 336 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 EMC10Q5UCC4 262 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 NEPROQ6NW34 567 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 PACS1Q6VY07 963 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 LYSMD3Q7Z3D4 306 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 OR4K2Q8NGD2 314 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 HDAC10Q969S8 669 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 CDKN2AIPNLQ96HQ2 116 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 TBATAQ96M53 351 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 ACOX2Q99424 681 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 UGT1A7Q9HAW7 530 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 UGT1A10Q9HAW8 530 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 UGT1A8Q9HAW9 530 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 ZFYVE1Q9HBF4 777 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 IL17CQ9P0M4 197 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 SENP1Q9P0U3 644 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 PPM1HQ9ULR3 514 aa18.24■□□□□ 0.51
HMGN1-206ENST00000431390 ZNF106Q9H2Y7 1883 aaKnown RBP18.24■□□□□ 0.51
HMGN1-206ENST00000431390 C1orf232A0A0U1RR37 186 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 H7C0S8 307 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 STX7O15400 261 aaKnown RBP18.23■□□□□ 0.51
HMGN1-206ENST00000431390 BUD23O43709 281 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms