RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 GAREM1Q9H706 876 aa18.61■□□□□ 0.57
DDR1-236ENST00000431373 KCTD5Q9NXV2 234 aa18.61■□□□□ 0.57
DDR1-236ENST00000431373 CDV3Q9UKY7 258 aaKnown RBP18.61■□□□□ 0.57
DDR1-236ENST00000431373 CEP250Q9BV73 2442 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 A0A0U1RQS6 177 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 C1orf232A0A0U1RR37 186 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 GOLGA8CPA6NN73 597 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 PGRMC1O00264 195 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 TCP1P17987 556 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 RABIFP47224 123 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 PFN3P60673 137 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 ZNF423Q2M1K9 1284 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 P3H1Q32P28 736 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 HSD11B1LQ7Z5J1 315 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 SPATS2Q86XZ4 545 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 DCP2Q8IU60 420 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 PRELID2Q8N945 189 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 NUS1Q96E22 293 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 DTD2Q96FN9 168 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 NAPGQ99747 312 aaPredicted RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 MAGEE1Q9HCI5 957 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 DNAAF2Q9NVR5 837 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 DRG1Q9Y295 367 aaKnown RBP18.6■□□□□ 0.57
DDR1-236ENST00000431373 SCN8AQ9UQD0 1980 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 CFAP54Q96N23 3096 aa18.6■□□□□ 0.57
DDR1-236ENST00000431373 ASCC3Q8N3C0 2202 aaKnown RBP18.59■□□□□ 0.57
DDR1-236ENST00000431373 TDRD6O60522 2096 aaKnown RBP18.59■□□□□ 0.57
DDR1-236ENST00000431373 DMXL1Q9Y485 3027 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 GOLGA6CA6NDK9 693 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 GOLGA6BA6NDN3 693 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 TOR1BO14657 336 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 DFNA5O60443 496 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 CLDN7O95471 211 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 IFNB1P01574 187 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 PCCBP05166 539 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 C1SP09871 688 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 ATXN1LP0C7T5 689 aaKnown RBP18.59■□□□□ 0.57
DDR1-236ENST00000431373 PIRTP0C851 137 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 GOLGA6DP0CG33 693 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 HLA-DPA1P20036 260 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 SDHBP21912 280 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 ACTN2P35609 894 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 ETV3P41162 512 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 STC1P52823 247 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 PTSQ03393 145 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 MTM1Q13496 603 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 SLC1A5Q15758 541 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 SIRPB2Q5JXA9 342 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 Q6ZVL8 140 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 KLHDC8BQ8IXV7 354 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 OXR1Q8N573 874 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 SLC25A41Q8N5S1 370 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 ACTRT1Q8TDG2 376 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 SRPK1Q96SB4 655 aaKnown RBP18.59■□□□□ 0.57
DDR1-236ENST00000431373 FICDQ9BVA6 458 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 ERVMER34-1Q9H9K5 563 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 IL21RQ9HBE5 538 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 GPR27Q9NS67 375 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 GOLGA6AQ9NYA3 693 aa18.59■□□□□ 0.57
DDR1-236ENST00000431373 CTAGE9A4FU28 777 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 ZNF185O15231 689 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 METTL18O95568 372 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 FGF1P05230 155 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 CHRNA4P43681 627 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 YPEL5P62699 121 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 INPP5AQ14642 412 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 CDKN3Q16667 212 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.56
DDR1-236ENST00000431373 UAP1L1Q3KQV9 507 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 PAPD7Q5XG87 772 aaKnown RBP18.58■□□□□ 0.56
DDR1-236ENST00000431373 KDM7AQ6ZMT4 941 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 LYSMD3Q7Z3D4 306 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 TECPR1Q7Z6L1 1165 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 RAVER1Q8IY67 606 aaKnown RBP18.58■□□□□ 0.56
DDR1-236ENST00000431373 SLC22A18ASQ8N1D0 253 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 CCDC89Q8N998 374 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 CCHCR1Q8TD31 782 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 LRRC45Q96CN5 670 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 ELF4Q99607 663 aaPredicted RBP18.58■□□□□ 0.56
DDR1-236ENST00000431373 ZFYVE1Q9HBF4 777 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 FNDC3AQ9Y2H6 1198 aaKnown RBP18.58■□□□□ 0.56
DDR1-236ENST00000431373 ZNF711Q9Y462 761 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 CABIN1Q9Y6J0 2220 aa18.58■□□□□ 0.56
DDR1-236ENST00000431373 SLC30A4O14863 429 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 AGTP01019 485 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 ZNF883P0CG24 379 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 ADRA1AP35348 466 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 KCNJ1P48048 391 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 THOP1P52888 689 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 PDE1CQ14123 709 aaPredicted RBP18.57■□□□□ 0.56
DDR1-236ENST00000431373 FAXCQ5TGI0 409 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 ESRP1Q6NXG1 681 aaKnown RBP18.57■□□□□ 0.56
DDR1-236ENST00000431373 RANBP10Q6VN20 620 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 ZNF765Q7L2R6 523 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 GSTA5Q7RTV2 222 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 PLA2G15Q8NCC3 412 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 AP1M1Q9BXS5 423 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 GPR63Q9BZJ6 419 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 TM7SF3Q9NS93 570 aa18.57■□□□□ 0.56
DDR1-236ENST00000431373 SMARCAL1Q9NZC9 954 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms