RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-219ENST00000429294 PARVAQ9NVD7 372 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 TRNAU1APQ9NX07 287 aaKnown RBP13.13□□□□□ -0.31
HLA-F-219ENST00000429294 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 FLNCQ14315 2725 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 ANKRD36A6QL64 1941 aa13.13□□□□□ -0.31
HLA-F-219ENST00000429294 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 TCRBV5S1A1TA0A578 114 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 C9orf172C9J069 976 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 B4GAT1O43505 415 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 FERP16591 822 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 CSTF2P33240 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 GPR3P46089 330 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PPM1FP49593 454 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 OR1D5P58170 312 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 UBXN1Q04323 297 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 ZNF235Q14590 738 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 C16orf72Q14CZ0 275 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 MCOLN2Q8IZK6 566 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 LZTR1Q8N653 840 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 IL22RA1Q8N6P7 574 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PDCD6IPQ8WUM4 868 aaKnown RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 NSMCE1Q8WV22 266 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PSKH2Q96QS6 385 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 DPYSL5Q9BPU6 564 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 LGR4Q9BXB1 951 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 ZMYND15Q9H091 742 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
HLA-F-219ENST00000429294 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 B4GALT6Q9UBX8 382 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
HLA-F-219ENST00000429294 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 TERTO14746 1132 aaKnown RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 SUV39H1O43463 412 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 SOCS5O75159 536 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ERCC2P18074 760 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 GNPDA1P46926 289 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 MAZP56270 477 aaKnown RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 LBRQ14739 615 aaKnown RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 DENND2CQ68D51 928 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ZNF438Q7Z4V0 828 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 HEATR4Q86WZ0 1026 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 AGBL5Q8NDL9 886 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ASPSCR1Q9BZE9 553 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
HLA-F-219ENST00000429294 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
HLA-F-219ENST00000429294 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 LGALS16A8MUM7 142 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 ECEL1O95672 775 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 FGF1P05230 155 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 CEACAM5P06731 702 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 CCL4P13236 92 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 ITGB6P18564 788 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 VIPR1P32241 457 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 CYP4F2P78329 520 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 CDK3Q00526 305 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 NFKB2Q00653 900 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 NR1D2Q14995 579 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 RAET1GQ6H3X3 334 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 ZNF574Q6ZN55 896 aaPredicted RBP13.1□□□□□ -0.31
HLA-F-219ENST00000429294 TMPRSS9Q7Z410 1059 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 C17orf82Q86X59 251 aaPredicted RBP13.1□□□□□ -0.31
HLA-F-219ENST00000429294 ARHGAP12Q8IWW6 846 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms