RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CFAP206Q8IYR0 622 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 CAPSLQ8WWF8 208 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 ECSITQ9BQ95 431 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 SMG9Q9H0W8 520 aaKnown RBP7.25□□□□□ -1.25
CNOT4-206ENST00000428680 ING2Q9H160 280 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 RNF39Q9H2S5 420 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 NDE1Q9NXR1 346 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 TMCC3Q9ULS5 477 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 PSMD13Q9UNM6 376 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 PADI2Q9Y2J8 665 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 PCDHGB3Q9Y5G1 929 aa7.25□□□□□ -1.25
CNOT4-206ENST00000428680 PPP1R3GB7ZBB8 358 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 LEFTY2O00292 366 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 USP12O75317 370 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ABCB1P08183 1280 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 UGT1A1P22309 533 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ME2P23368 584 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MLLT3P42568 568 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CARD16Q5EG05 197 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PRRT3Q5FWE3 981 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 RFX8Q6ZV50 586 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 C16orf62Q7Z3J2 963 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 KCNK18Q7Z418 384 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MILR1Q7Z6M3 343 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 LMNTD2Q8IXW0 634 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 METTL6Q8TCB7 284 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SLC35C1Q96A29 364 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 VPS33AQ96AX1 596 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SLC22A18Q96BI1 424 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 THOC1Q96FV9 657 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ZNF514Q96K75 400 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 C12orf66Q96MD2 445 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 GAL3ST4Q96RP7 486 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 BRINP2Q9C0B6 783 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 FCF1Q9Y324 198 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 USP15Q9Y4E8 981 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 RAI2Q9Y5P3 530 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 GLYATL1P3A0A0U1RQE8 302 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 KCNU1A8MYU2 1149 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 WNT9AO14904 365 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CDH2P19022 906 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ADRA1BP35368 520 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 NBL1P41271 181 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CYP51A1Q16850 503 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SLC10A6Q3KNW5 377 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 C6orf132Q5T0Z8 1188 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 BHLHB9Q6PI77 547 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 GPR149Q86SP6 731 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 AMZ2Q86W34 360 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 GPSM1Q86YR5 675 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 C1orf127Q8N9H9 656 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 HNRNPABQ99729 332 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 AIF1LQ9BQI0 150 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 BPIFA3Q9BQP9 254 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 AGXT2Q9BYV1 514 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ABCG8Q9H221 673 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 TRPV5Q9NQA5 729 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 TMPRSS4Q9NRS4 437 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 DCTN4Q9UJW0 460 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CASKO14936 926 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MUSKO15146 869 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ADRB2P07550 413 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 FAM163BP0C2L3 166 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 HLA-EP13747 358 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 NEK2P51955 445 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ZNF143P52747 638 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PPP3CAQ08209 521 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MGAT5Q09328 741 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ARSIQ5FYB1 569 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 EMBQ6PCB8 327 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CYP4Z1Q86W10 505 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SLC13A5Q86YT5 568 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MRPL43Q8N983 215 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CCDC197Q8NCU1 140 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MAPK15Q8TD08 544 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 HMCESQ96FZ2 354 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PRR11Q96HE9 360 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 LOXL4Q96JB6 756 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ADI1Q9BV57 179 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PHACTR1Q9C0D0 580 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 NEK6Q9HC98 313 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 FBRSL1Q9HCM7 1045 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CACNG4Q9UBN1 327 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 DNAJB4Q9UDY4 337 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 C19orf25Q9UFG5 118 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 TBC1D30Q9Y2I9 924 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 ZNF780BQ9Y6R6 833 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 RPP40O75818 363 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MATN4O95460 622 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SCNN1AP37088 669 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 MAPKAPK2P49137 400 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 CXCR3P49682 368 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 SERPINB8P50452 374 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 TOB1P50616 345 aaPredicted RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PDX1P52945 283 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 NFATC2Q13469 925 aa7.24□□□□□ -1.25
CNOT4-206ENST00000428680 AUHQ13825 339 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 EIF4HQ15056 248 aaKnown RBP7.24□□□□□ -1.25
CNOT4-206ENST00000428680 PDCD2Q16342 344 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms