RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ZNF449Q6P9G9 518 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 PTAR1Q7Z6K3 402 aaPredicted RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 ADHFE1Q8IWW8 467 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 OR6P1Q8NGX9 317 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 EID2BQ96D98 161 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 PGM2Q96G03 612 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 FAM129BQ96TA1 746 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 MFSD1Q9H3U5 465 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 PCDH12Q9NPG4 1184 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 MARCH4Q9P2E8 410 aaPredicted RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 THEGQ9P2T0 379 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 NDRG2Q9UN36 371 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 SPTBN5Q9NRC6 3674 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 XIRP2A4UGR9 3374 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 GOLGA8CPA6NN73 597 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 TRIM49D1C9J1S8 452 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 C1QTNF3-AMACRE9PGA6 284 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 SPINT1O43278 529 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 TIMP2P16035 220 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 KRT15P19012 456 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 COL9A1P20849 921 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 DRD1P21728 446 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 ITGB7P26010 798 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 VIPR1P32241 457 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 HPDP32754 393 aaPredicted RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 GP5P40197 560 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 RALGDSQ12967 914 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 CDKN3Q16667 212 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 KIAA1211LQ6NV74 962 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 CRTC1Q6UUV9 634 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 CYS1Q717R9 158 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 STRA8Q7Z7C7 330 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 DSG4Q86SJ6 1040 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 LDB1Q86U70 411 aaPredicted RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 CNTN4Q8IWV2 1026 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 NDUFAF2Q8N183 169 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 IL17RCQ8NAC3 791 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 TXNDC5Q8NBS9 432 aaKnown RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 FAM3CQ92520 227 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 PEX13Q92968 403 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 LRIG1Q96JA1 1093 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 LYSMD1Q96S90 227 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 CPNE1Q99829 537 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 STMN4Q9H169 189 aaPredicted RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 TRABDQ9H4I3 376 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 FBXO6Q9NRD1 293 aaPredicted RBP12.07□□□□□ -0.48
RFC4-206ENST00000427785 IL17CQ9P0M4 197 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 DKK3Q9UBP4 350 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 SUN2Q9UH99 717 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 ZNF180Q9UJW8 692 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 RIMKLBQ9ULI2 386 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 PKP3Q9Y446 797 aa12.07□□□□□ -0.48
RFC4-206ENST00000427785 A0A1W2PQ67 120 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 NPC1O15118 1278 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 POLR3GO15318 223 aaPredicted RBP12.06□□□□□ -0.48
RFC4-206ENST00000427785 GPR39O43194 453 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SLC7A4O43246 635 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SYNCRIPO60506 623 aaKnown RBP12.06□□□□□ -0.48
RFC4-206ENST00000427785 ADAM23O75077 832 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 CYP2A6P11509 494 aaPredicted RBP12.06□□□□□ -0.48
RFC4-206ENST00000427785 HOXB2P14652 356 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 ATP5DP30049 168 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 NTSR1P30989 418 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 MC4RP32245 332 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 FOXN2P32314 431 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 MMP12P39900 470 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 CTBP1Q13363 440 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 CAMK2GQ13555 558 aaPredicted RBP12.06□□□□□ -0.48
RFC4-206ENST00000427785 SEMA3AQ14563 771 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 RASA2Q15283 850 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 UGP2Q16851 508 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 TNFAIP8L3Q5GJ75 292 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 FAM151BQ6UXP7 276 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 DPPA4Q7L190 304 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 TAOK1Q7L7X3 1001 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 TRABD2AQ86V40 505 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 TMIEQ8NEW7 156 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 RPLP0P6Q8NHW5 317 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 MZB1Q8WU39 189 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms