RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 HSD11B1LQ7Z5J1 315 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 TSPAN33Q86UF1 283 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 RFX6Q8HWS3 928 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 SDR16C5Q8N3Y7 309 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 PIH1D2Q8WWB5 315 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 OR1E3Q8WZA6 343 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 RNF25Q96BH1 459 aaPredicted RBP18.44■□□□□ 0.54
GPC1-205ENST00000427506 DTD2Q96FN9 168 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 MCCC1Q96RQ3 725 aaPredicted RBP18.44■□□□□ 0.54
GPC1-205ENST00000427506 LGR4Q9BXB1 951 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 PHPT1Q9NRX4 125 aaPredicted RBP18.44■□□□□ 0.54
GPC1-205ENST00000427506 DDX56Q9NY93 547 aaKnown RBP18.44■□□□□ 0.54
GPC1-205ENST00000427506 PADI4Q9UM07 663 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 GPR34Q9UPC5 381 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 HYOU1Q9Y4L1 999 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 SHROOM3Q8TF72 1996 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 ZNF487B1APH4 448 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 KCNK1O00180 336 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 FZD6O60353 706 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 JCHAINP01591 159 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 ZFXP17010 805 aaPredicted RBP18.43■□□□□ 0.54
GPC1-205ENST00000427506 RTP5Q14D33 572 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 LRRC38Q5VT99 294 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 CDCP2Q5VXM1 449 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 ALG1LQ6GMV1 187 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 C19orf48Q6RUI8 117 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 Q6ZVL8 140 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 PELI3Q8N2H9 469 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 PLD5Q8N7P1 536 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 ARL10Q8N8L6 244 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 TC2NQ8N9U0 490 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 NAT6Q93015 286 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 LGMNQ99538 433 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 SYNDIG1Q9H7V2 258 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 CYP4F12Q9HCS2 524 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 FGF22Q9HCT0 170 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 MRPL40Q9NQ50 206 aaKnown RBP18.43■□□□□ 0.54
GPC1-205ENST00000427506 CHKBQ9Y259 395 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 PPIL1Q9Y3C6 166 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 PCDHB1Q9Y5F3 818 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 DGKBQ9Y6T7 804 aa18.43■□□□□ 0.54
GPC1-205ENST00000427506 GOLGA4Q13439 2230 aaKnown RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 A0A0U1RQS6 177 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 C3orf70A6NLC5 250 aaPredicted RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 TNFRSF10CO14798 259 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 CSO75390 466 aaKnown RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 MYCLP1P12525 358 aaPredicted RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 COMTP21964 271 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 TGM2P21980 687 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 DYNLT1P63172 113 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 PPIDQ08752 370 aaKnown RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 AP1B1Q10567 949 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 PERM1Q5SV97 790 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 KCTD16Q68DU8 428 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 SLC9A4Q6AI14 798 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 RAET1GQ6H3X3 334 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 TAF8Q7Z7C8 310 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 HEATR4Q86WZ0 1026 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 VSIG1Q86XK7 387 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 ARRDC2Q8TBH0 407 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 HNRNPLLQ8WVV9 542 aaKnown RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 DCBLD2Q96PD2 775 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 RBM15Q96T37 977 aaKnown RBP eCLIP18.42■□□□□ 0.54
GPC1-205ENST00000427506 TDRD1Q9BXT4 1180 aaKnown RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
GPC1-205ENST00000427506 PCDH9Q9HC56 1237 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 LHX6Q9UPM6 363 aa18.42■□□□□ 0.54
GPC1-205ENST00000427506 A0A0J9YYE9 177 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 PRSS38A1L453 326 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 PPP1R12AO14974 1030 aaPredicted RBP18.41■□□□□ 0.54
GPC1-205ENST00000427506 TRBC1P01850 177 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 NIPAL4Q0D2K0 466 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 PDK1Q15118 436 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 TCEAL1Q15170 157 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 SPA17Q15506 151 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 LRRC66Q68CR7 880 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 NPNTQ6UXI9 565 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 CBARPQ8N350 705 aaPredicted RBP18.41■□□□□ 0.54
GPC1-205ENST00000427506 KYQ8NBH2 561 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 FAM46DQ8NEK8 389 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 LPCAT1Q8NF37 534 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 SMIM14Q96QK8 99 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 CCDC3Q9BQI4 270 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 TMEM168Q9H0V1 697 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 LUC7LQ9NQ29 371 aaKnown RBP18.41■□□□□ 0.54
GPC1-205ENST00000427506 SEPT10Q9P0V9 454 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 CD84Q9UIB8 345 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 RALYQ9UKM9 306 aaKnown RBP18.41■□□□□ 0.54
GPC1-205ENST00000427506 DNPEPQ9ULA0 475 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 GPSM3Q9Y4H4 160 aa18.41■□□□□ 0.54
GPC1-205ENST00000427506 USP12O75317 370 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 ZNF30P17039 623 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 CYLC1P35663 651 aaPredicted RBP18.4■□□□□ 0.54
GPC1-205ENST00000427506 CD86P42081 329 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 GPR1P46091 355 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 IHHQ14623 411 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 TECPR1Q7Z6L1 1165 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 AP2M1Q96CW1 435 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 TEX101Q9BY14 249 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms