RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 RAB32Q13637 225 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 RBMS2Q15434 407 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 PTGISQ16647 500 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 PTPROQ16827 1216 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 ST3GAL2Q16842 350 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 KLHL22Q53GT1 634 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 SPATA1Q5VX52 437 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 ANKRD40Q6AI12 368 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 ISM2Q6H9L7 571 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 SARM1Q6SZW1 724 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 PTCHD4Q6ZW05 846 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 MAEAQ7L5Y9 396 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 IRF2BP2Q7Z5L9 587 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 SRGAP1Q7Z6B7 1085 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 DEFB128Q7Z7B8 93 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 SPARTQ8N0X7 666 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 RNF149Q8NC42 400 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 OSR1Q8TAX0 266 aaPredicted RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 DNAJB3Q8WWF6 145 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 P2RX5Q93086 422 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 MRPL38Q96DV4 380 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 VCPIP1Q96JH7 1222 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 TGS1Q96RS0 853 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 BRINP2Q9C0B6 783 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 C2orf40Q9H1Z8 148 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 TSPY26PQ9H489 355 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 TMEM206Q9H813 350 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 MRPL44Q9H9J2 332 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 AGPAT3Q9NRZ7 376 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 TYW1Q9NV66 732 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 CGNQ9P2M7 1197 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
C9orf3-205ENST00000427193 MTUS1Q9ULD2 1270 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 PAXBP1Q9Y5B6 917 aa5.82□□□□□ -1.48
C9orf3-205ENST00000427193 CNTNAP2Q9UHC6 1331 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TRIP12Q14669 1992 aaPredicted RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 A0A087WZ62 844 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 LY6G6EA0A0G2JKS1 128 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TRIM49BA6NDI0 452 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 H3BNC9 293 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 B4GALT5O43286 388 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 AP1G1O43747 822 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TSPAN1O60635 241 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 GCNT3O95395 438 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 CXCL10P02778 98 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 KRT18P05783 430 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TMOD1P28289 359 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 NLRP11P59045 1033 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 IGBP1P78318 339 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 MRPS6P82932 125 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 FKBP3Q00688 224 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 MCL1Q07820 350 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 LMAN2Q12907 356 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 SLC13A2Q13183 592 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 FBXO47Q5MNV8 452 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 C1orf220Q5T0J3 134 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TRMT1LQ7Z2T5 733 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TMCO2Q7Z6W1 182 aaPredicted RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 LUZP1Q86V48 1076 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 RHPN2Q8IUC4 686 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 GOLGA5Q8TBA6 731 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 NSMCE1Q8WV22 266 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 NELFBQ8WX92 580 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 CCDC47Q96A33 483 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 IFT74Q96LB3 600 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 ACCSQ96QU6 501 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 MAP7D2Q96T17 732 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 ACO2Q99798 780 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 THAP9Q9H5L6 903 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 SNX15Q9NRS6 342 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 SAMSN1Q9NSI8 373 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TBC1D7Q9P0N9 293 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 LIMA1Q9UHB6 759 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 TNFSF13BQ9Y275 285 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 DRG1Q9Y295 367 aaKnown RBP5.81□□□□□ -1.48
C9orf3-205ENST00000427193 SCN5AQ14524 2016 aa5.81□□□□□ -1.48
C9orf3-205ENST00000427193 ASH1LQ9NR48 2969 aaKnown RBP5.8□□□□□ -1.48
C9orf3-205ENST00000427193 NAV2Q8IVL1 2488 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 BICDL2A1A5D9 508 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 LRRIQ4A6NIV6 560 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 CCDC169A6NNP5 214 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 K7ENM7 598 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 K7ERI5 159 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 ADAM10O14672 748 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 PMM2O15305 246 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 INPPL1O15357 1258 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 MBTPS2O43462 519 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 TBC1D4O60343 1298 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 TOM1L1O75674 476 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 AKAP3O75969 853 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 UBXN7O94888 489 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 GJB5O95377 273 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 ATP1A3P13637 1013 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 PRF1P14222 555 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 ARF4P18085 180 aaPredicted RBP5.8□□□□□ -1.48
C9orf3-205ENST00000427193 EPHA3P29320 983 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 PRKAR1BP31321 381 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 PBX1P40424 430 aa5.8□□□□□ -1.48
C9orf3-205ENST00000427193 CASP4P49662 377 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms