RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 NTN3O00634 580 aaPredicted RBP20.05■□□□□ 0.8
CCDC107-206ENST00000426546 HEXIM1O94992 359 aaKnown RBP20.05■□□□□ 0.8
CCDC107-206ENST00000426546 HNRNPH3P31942 346 aaKnown RBP20.05■□□□□ 0.8
CCDC107-206ENST00000426546 CASP14P31944 242 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 TRAF2Q12933 501 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 TCEA2Q15560 299 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 C3orf38Q5JPI3 329 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 GAS2L3Q86XJ1 694 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 TEX26Q8N6G2 289 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 ZNF564Q8TBZ8 553 aaPredicted RBP20.05■□□□□ 0.8
CCDC107-206ENST00000426546 CCDC74AQ96AQ1 378 aa20.05■□□□□ 0.8
CCDC107-206ENST00000426546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC107-206ENST00000426546 A0A1W2PNU3 283 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 PSMD11O00231 422 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 PGLSO95336 258 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 TPM3P06753 285 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 CD48P09326 243 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 CYP2A6P11509 494 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MYCLP1P12525 358 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MLLT3P42568 568 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 SSR1P43307 286 aaKnown RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 ARSEP51690 589 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 PDX1P52945 283 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MAXP61244 160 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MMRN1Q13201 1228 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 TSR1Q2NL82 804 aaKnown RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 USP45Q70EL2 814 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 PELI3Q8N2H9 469 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 CBARPQ8N350 705 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 GPR156Q8NFN8 814 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 DTD2Q96FN9 168 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 SCRN2Q96FV2 425 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 SLC46A1Q96NT5 459 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MCCC1Q96RQ3 725 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 ZNF670Q9BS34 389 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 LGR4Q9BXB1 951 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 MRPL40Q9NQ50 206 aaKnown RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 UVRAGQ9P2Y5 699 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 LCMT1Q9UIC8 334 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 RABGEF1Q9UJ41 708 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 PPIL1Q9Y3C6 166 aa20.04■□□□□ 0.8
CCDC107-206ENST00000426546 ARHGEF17Q96PE2 2063 aaPredicted RBP20.04■□□□□ 0.8
CCDC107-206ENST00000426546 TENM4Q6N022 2769 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 PRSS38A1L453 326 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 MFSD11O43934 449 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 LHCGRP22888 699 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 RBMS1P29558 406 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 GARSP41250 739 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 GALNT2Q10471 571 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 DPYSL3Q14195 570 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 PAFAH1B3Q15102 231 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 ARMC12Q5T9G4 340 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 NCBP2-AS2Q69YL0 99 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 OGFOD3Q6PK18 319 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 TAF8Q7Z7C8 310 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 FATE1Q969F0 183 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 PRR11Q96HE9 360 aaPredicted RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 GFM1Q96RP9 751 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 TEX101Q9BY14 249 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 POLR1EQ9GZS1 481 aaKnown RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 TMEM168Q9H0V1 697 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 RBSNQ9H1K0 784 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 SYNDIG1Q9H7V2 258 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 CPNE5Q9HCH3 593 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 CYP4F12Q9HCS2 524 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 NT5MQ9NPB1 228 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 PHPT1Q9NRX4 125 aaPredicted RBP20.03■□□□□ 0.8
CCDC107-206ENST00000426546 CTTNBP2NLQ9P2B4 639 aa20.03■□□□□ 0.8
CCDC107-206ENST00000426546 CCDC187A0A096LP49 1063 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 NPIPB15A6NHN6 443 aaPredicted RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 D6RAR5 112 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 CASC3O15234 703 aaKnown RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 PROSCO94903 275 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 TEAD1P28347 426 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 UCNP55089 124 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 TMPRSS3P57727 454 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 RHDQ02161 417 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 ARHGEF7Q14155 803 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 PDK2Q15119 407 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 SLC18A3Q16572 532 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 TAF1BQ53T94 588 aaPredicted RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 BROXQ5VW32 411 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 ALG1LQ6GMV1 187 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 TIGD7Q6NT04 549 aaPredicted RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 HEATR4Q86WZ0 1026 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 ARL14Q8N4G2 192 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 FAM46DQ8NEK8 389 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 KCNE4Q8WWG9 221 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 CTNNBL1Q8WYA6 563 aaPredicted RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 LIN37Q96GY3 246 aaPredicted RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 DPH1Q9BZG8 443 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 XPO4Q9C0E2 1151 aaKnown RBP20.02■□□□□ 0.8
CCDC107-206ENST00000426546 HAUS2Q9NVX0 235 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 AMACRQ9UHK6 382 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 APPL1Q9UKG1 709 aa20.02■□□□□ 0.8
CCDC107-206ENST00000426546 UNC13CQ8NB66 2214 aa20.01■□□□□ 0.79
CCDC107-206ENST00000426546 CAPN8A6NHC0 703 aa20.01■□□□□ 0.79
CCDC107-206ENST00000426546 CDRT15L2A8MXV6 281 aa20.01■□□□□ 0.79
CCDC107-206ENST00000426546 NOBOXO60393 691 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms