RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 DPYSL2Q16555 572 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 SMTNL2Q2TAL5 461 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ANO6Q4KMQ2 910 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 C14orf28Q4W4Y0 310 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 HSD11B1LQ7Z5J1 315 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 POLNQ7Z5Q5 900 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 SPRED1Q7Z699 444 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF605Q86T29 641 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 C17orf82Q86X59 251 aaPredicted RBP10.06□□□□□ -0.8
GACAT3-201ENST00000426539 NRROSQ86YC3 692 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 SLITRK4Q8IW52 837 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 OR6C4Q8NGE1 309 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 CCDC97Q96F63 343 aaPredicted RBP10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF599Q96NL3 588 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 CSPG4P5Q96PW8 444 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 MGME1Q9BQP7 344 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 BPIFA3Q9BQP9 254 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 NOD2Q9HC29 1040 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 CYP4F12Q9HCS2 524 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 SPATS2LQ9NUQ6 558 aaKnown RBP10.06□□□□□ -0.8
GACAT3-201ENST00000426539 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ACSL6Q9UKU0 697 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 PCDHGA7Q9Y5G6 932 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 ST14Q9Y5Y6 855 aa10.06□□□□□ -0.8
GACAT3-201ENST00000426539 A0A1B0GTH6 734 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 A0A1W2PQC6 194 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 PRSS38A1L453 326 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 B4DGG1 531 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 H3BRJ5 948 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 AGRPO00253 132 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 B4GAT1O43505 415 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 CEACAM5P06731 702 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 RARAP10276 462 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 KRT10P13645 584 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 PNLIPP16233 465 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ITIH1P19827 911 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 KELP23276 732 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 VIPR1P32241 457 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ETV5P41161 510 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ETV3P41162 512 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 RENBPP51606 427 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF135P52742 658 aaPredicted RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 MAZP56270 477 aaKnown RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 MAXP61244 160 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 POLR2LP62875 67 aaKnown RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 LSM11P83369 360 aaKnown RBP eCLIP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 KLHL30Q0D2K2 578 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 IHHQ14623 411 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 RFLNAQ6ZTI6 216 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 TSPAN33Q86UF1 283 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 HEATR4Q86WZ0 1026 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 LZTR1Q8N653 840 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 GPBAR1Q8TDU6 330 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 HSPH1Q92598 858 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 NUS1Q96E22 293 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 DTD2Q96FN9 168 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 TMEM74Q96NL1 305 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 NUDCD1Q96RS6 583 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 CCNL2Q96S94 520 aaPredicted RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 TEX101Q9BY14 249 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 FRMD8Q9BZ67 464 aaPredicted RBP10.05□□□□□ -0.8
GACAT3-201ENST00000426539 STRADBQ9C0K7 418 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 DPEP2Q9H4A9 486 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 ZWILCHQ9H900 591 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 LRIT1Q9P2V4 623 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 PISDQ9UG56 409 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 MOSPD1Q9UJG1 213 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 LOXL2Q9Y4K0 774 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 SCINQ9Y6U3 715 aa10.05□□□□□ -0.8
GACAT3-201ENST00000426539 GCN1Q92616 2671 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 TMX2-CTNND1H3BSU7 103 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 NUDT21O43809 227 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 SOCS5O75159 536 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PGLSO95336 258 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 MBD3O95983 291 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 SOD1P00441 154 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 CPP00450 1065 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 FGF1P05230 155 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 MYBL1P10243 752 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 CCNB1P14635 433 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 IL4RP24394 825 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 AK4P27144 223 aaPredicted RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 ANP32AP39687 249 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 CDK3Q00526 305 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 SLC25A11Q02978 314 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF235Q14590 738 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 LINC00303Q3SY05 128 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 BOLA3Q53S33 107 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 HGSNATQ68CP4 663 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 DENND2CQ68D51 928 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms