RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MMP13P45452 471 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 LIG3P49916 1009 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 TAS2R40P59535 323 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 YPEL5P62699 121 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 ITKQ08881 620 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 PDK2Q15119 407 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 ISXQ2M1V0 245 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 ODF2Q5BJF6 829 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 NCBP2-AS2Q69YL0 99 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 RHOT2Q8IXI1 618 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 SLC25A45Q8N413 288 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.37
SGCE-203ENST00000425444 ZNF548Q8NEK5 533 aaPredicted RBP12.77□□□□□ -0.37
SGCE-203ENST00000425444 OR4C6Q8NH72 309 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
SGCE-203ENST00000425444 A0A1W2PNU3 283 aaPredicted RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 EFSO43281 561 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 SOCS5O75159 536 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 MAP3K6O95382 1288 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 PEX11BO96011 259 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 CPP00450 1065 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ITGB2P05107 769 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 IL4RP24394 825 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 NFKBIAP25963 317 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 HTR1BP28222 390 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 GARSP41250 739 aaKnown RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 ARSEP51690 589 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 MAXP61244 160 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 TPRG1LQ5T0D9 272 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 TIGD7Q6NT04 549 aaPredicted RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ARL14Q8N4G2 192 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 PCDH19Q8TAB3 1148 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 MAPK15Q8TD08 544 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 LMX1AQ8TE12 382 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 ZNF830Q96NB3 372 aaPredicted RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 PSMG3-AS1Q96PY0 264 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 MGME1Q9BQP7 344 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 DUSP23Q9BVJ7 150 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 CAAP1Q9H8G2 361 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 NT5MQ9NPB1 228 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 EVA1BQ9NVM1 165 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 HAUS2Q9NVX0 235 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 NLGN3Q9NZ94 848 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 APOBEC3BQ9UH17 382 aaKnown RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 ATXN7L1Q9ULK2 861 aaPredicted RBP12.76□□□□□ -0.37
SGCE-203ENST00000425444 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 PCDHGC4Q9Y5F7 938 aa12.76□□□□□ -0.37
SGCE-203ENST00000425444 LRRD1A4D1F6 860 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 A8MX80 341 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 TRAFD1O14545 582 aaPredicted RBP12.75□□□□□ -0.37
SGCE-203ENST00000425444 TOR1BO14657 336 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 SCAMP1O15126 338 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 AQP9O43315 295 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 PPFIA2O75334 1257 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 GP1BAP07359 652 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 TNNT1P13805 278 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 MX2P20592 715 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 RP1P56715 2156 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 GALNT2Q10471 571 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
SGCE-203ENST00000425444 PAFAH1B3Q15102 231 aaKnown RBP12.75□□□□□ -0.37
SGCE-203ENST00000425444 WSCD2Q2TBF2 565 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 FAXCQ5TGI0 409 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 DPPA4Q7L190 304 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 PHACTR4Q8IZ21 702 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 RBFAQ8N0V3 343 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 PGBD5Q8N414 524 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.75□□□□□ -0.37
SGCE-203ENST00000425444 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 SLC13A1Q9BZW2 595 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
SGCE-203ENST00000425444 NOD2Q9HC29 1040 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 SPASTQ9UBP0 616 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
SGCE-203ENST00000425444 BLACEA4D250 179 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 PMS2P1A4D2B8 440 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 K7ESM1 405 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 SPOPO43791 374 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 TNFSF15O95150 251 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 KRT1P04264 644 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 KDELR1P24390 212 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms