RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 SNIP1Q8TAD8 396 aaKnown RBP18.48■□□□□ 0.55
NUP50-207ENST00000424634 FGF11Q92914 225 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 NUS1Q96E22 293 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 MCCC1Q96RQ3 725 aaPredicted RBP18.48■□□□□ 0.55
NUP50-207ENST00000424634 CCDC3Q9BQI4 270 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 DEF6Q9H4E7 631 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 SPTLC3Q9NUV7 552 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 RABGEF1Q9UJ41 708 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 GPR34Q9UPC5 381 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 PTPRQQ9UMZ3 2332 aa18.48■□□□□ 0.55
NUP50-207ENST00000424634 TNFRSF10CO14798 259 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 AKR1B10O60218 316 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 FUCA1P04066 466 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 KRT7P08729 469 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 KDELR1P24390 212 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 CCNCP24863 283 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 MAN1A1P33908 653 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 DSC2Q02487 901 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 ITKQ08881 620 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 IFI16Q16666 785 aaKnown RBP18.47■□□□□ 0.55
NUP50-207ENST00000424634 TBC1D25Q3MII6 688 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 ALG1LQ6GMV1 187 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 Q6ZVL8 140 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 GKN2Q86XP6 184 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 MAP7D3Q8IWC1 876 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 SFTPA2Q8IWL1 248 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP50-207ENST00000424634 ARL10Q8N8L6 244 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 CCL4L1Q8NHW4 92 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 TPCN2Q8NHX9 752 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 SCG3Q8WXD2 468 aaKnown RBP18.47■□□□□ 0.55
NUP50-207ENST00000424634 NAT6Q93015 286 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 FATE1Q969F0 183 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 DTD2Q96FN9 168 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 TMEM168Q9H0V1 697 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 WDR26Q9H7D7 661 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 NHEJ1Q9H9Q4 299 aaPredicted RBP18.47■□□□□ 0.55
NUP50-207ENST00000424634 RBM22Q9NW64 420 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP50-207ENST00000424634 ZNHIT6Q9NWK9 470 aaKnown RBP18.47■□□□□ 0.55
NUP50-207ENST00000424634 ENTPD2Q9Y5L3 495 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 UNC13CQ8NB66 2214 aa18.47■□□□□ 0.55
NUP50-207ENST00000424634 MFAP3LO75121 409 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 CYP2A6P11509 494 aaPredicted RBP18.46■□□□□ 0.55
NUP50-207ENST00000424634 LSSP48449 732 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 GABREP78334 506 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 NIPAL4Q0D2K0 466 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 FAM182AQ5T1J6 154 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 OGFOD3Q6PK18 319 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 RBM44Q6ZP01 1051 aaKnown RBP18.46■□□□□ 0.55
NUP50-207ENST00000424634 TECPR1Q7Z6L1 1165 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 GPR156Q8NFN8 814 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 ARRDC2Q8TBH0 407 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 ATXN7L3BQ96GX2 97 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 RNF157Q96PX1 679 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 TEX101Q9BY14 249 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 POLR1EQ9GZS1 481 aaKnown RBP18.46■□□□□ 0.55
NUP50-207ENST00000424634 POLR1BQ9H9Y6 1135 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 CYP4F12Q9HCS2 524 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 DTLQ9NZJ0 730 aa18.46■□□□□ 0.55
NUP50-207ENST00000424634 C3orf70A6NLC5 250 aaPredicted RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 PSMD11O00231 422 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 NTN3O00634 580 aaPredicted RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 PRLP01236 227 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 CEACAM5P06731 702 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 MYCLP1P12525 358 aaPredicted RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 CCNB1P14635 433 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 KELP23276 732 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 ACTN2P35609 894 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 PDX1P52945 283 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 PTSQ03393 145 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 TSR1Q2NL82 804 aaKnown RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 TIGD7Q6NT04 549 aaPredicted RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 TAF8Q7Z7C8 310 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 HEATR4Q86WZ0 1026 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 PTCD2Q8WV60 388 aaKnown RBP18.45■□□□□ 0.54
NUP50-207ENST00000424634 CCDC74AQ96AQ1 378 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 CCDC42Q96M95 316 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 LCMT1Q9UIC8 334 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 CHKBQ9Y259 395 aa18.45■□□□□ 0.54
NUP50-207ENST00000424634 A0A0J9YYE9 177 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 PRSS38A1L453 326 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 PMS2P1A4D2B8 440 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 NOBOXO60393 691 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 TCEA3O75764 348 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 DXOO77932 396 aaKnown RBP18.44■□□□□ 0.54
NUP50-207ENST00000424634 MTA2O94776 668 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 TRBC1P01850 177 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 HLA-DQB2P05538 268 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 ABCG1P45844 678 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 CCL7P80098 99 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 TBX2Q13207 712 aaPredicted RBP18.44■□□□□ 0.54
NUP50-207ENST00000424634 ARHGEF7Q14155 803 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 ZFYVE27Q5T4F4 411 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 USP45Q70EL2 814 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 PLD5Q8N7P1 536 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 FAM46DQ8NEK8 389 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 PRR11Q96HE9 360 aaPredicted RBP18.44■□□□□ 0.54
NUP50-207ENST00000424634 HIC2Q96JB3 615 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 LGMNQ99538 433 aa18.44■□□□□ 0.54
NUP50-207ENST00000424634 FRMD8Q9BZ67 464 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms