RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NAGSQ8N159 534 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 KIAA1143Q96AT1 154 aaPredicted RBP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 RTP4Q96DX8 246 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 CARS2Q9HA77 564 aaKnown RBP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 SPTBN1Q01082 2364 aaKnown RBP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 UNC79Q9P2D8 2635 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 PRR19A6NJB7 356 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 MTSS1O43312 755 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 MMEP08473 750 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 ELFN1P0C7U0 828 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 MYCLP1P12525 358 aaPredicted RBP16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 MMP8P22894 467 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 CSF2RBP32927 897 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 POLR2LP62875 67 aaKnown RBP16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 ABHD18Q0P651 414 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 PEX6Q13608 980 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 SLFN11Q7Z7L1 901 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 PYROXD2Q8N2H3 581 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 JOSD2Q8TAC2 188 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 NAA15Q9BXJ9 866 aaKnown RBP16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 TEX101Q9BY14 249 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 ATP13A3Q9H7F0 1226 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 TMEM9Q9P0T7 183 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 ST14Q9Y5Y6 855 aa16.74■□□□□ 0.27
CHCHD3-202ENST00000423635 EFCAB7A8K855 629 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 TEX33O43247 280 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 PRKAR1AP10644 381 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 MPSTP25325 297 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 AK4P27144 223 aaPredicted RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 SERPINA4P29622 427 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 OAS2P29728 719 aaKnown RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 GPLD1P80108 840 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 MC2RQ01718 297 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 MC1RQ01726 317 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 SEPT6Q14141 434 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 DEFB109BQ30KR1 87 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 TIPARPQ7Z3E1 657 aaKnown RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 SRLQ86TD4 932 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 FAM129CQ86XR2 697 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 FAM172AQ8WUF8 416 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 PATE1Q8WXA2 126 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 COQ10AQ96MF6 247 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 ZPBPQ9BS86 351 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 LRRC19Q9H756 370 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 CATSPERBQ9H7T0 1116 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 FBXO8Q9NRD0 319 aa16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 PLEKHB1Q9UF11 243 aaPredicted RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 TMEM184BQ9Y519 407 aaPredicted RBP16.73■□□□□ 0.27
CHCHD3-202ENST00000423635 J3KR12 359 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 PRAMEF11O60813 436 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 MTIF2P46199 727 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 RGRP47804 291 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 CTBSQ01459 385 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 BIRC2Q13490 618 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 KLHDC7AQ5VTJ3 777 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 HIST2H2BCQ6DN03 193 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 ARHGAP22Q7Z5H3 698 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 ZNF677Q86XU0 584 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 NRSN1Q8IZ57 195 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 CBARPQ8N350 705 aaPredicted RBP16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 EPS8L1Q8TE68 723 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 TRIT1Q9H3H1 467 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 PHPT1Q9NRX4 125 aaPredicted RBP16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 KCTD5Q9NXV2 234 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 KCNK4Q9NYG8 393 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 SUFUQ9UMX1 484 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 FHOD1Q9Y613 1164 aa16.72■□□□□ 0.27
CHCHD3-202ENST00000423635 TRAFD1O14545 582 aaPredicted RBP16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 BCL2L1Q07817 233 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 ACOX1Q15067 660 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 TCTN3Q6NUS6 607 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 CEACAM20Q6UY09 585 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 PHLDB2Q86SQ0 1253 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 UNC5BQ8IZJ1 945 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 TSEN2Q8NCE0 465 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 SPOCK2Q92563 424 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 NDST4Q9H3R1 872 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 TP53TG5Q9Y2B4 290 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 SLC17A4Q9Y2C5 497 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 KCTD3Q9Y597 815 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 KCNMB2Q9Y691 235 aa16.71■□□□□ 0.27
CHCHD3-202ENST00000423635 IVLP07476 585 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 KRT3P12035 628 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 TCN2P20062 427 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 TEAD1P28347 426 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 ERCC5P28715 1186 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 MAN1A1P33908 653 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 RFC1P35251 1148 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 ADCY8P40145 1251 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 GNPDA1P46926 289 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 FASLGP48023 281 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 NDST2P52849 883 aa16.7■□□□□ 0.26
CHCHD3-202ENST00000423635 MLLT10P55197 1068 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms