RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ARHGAP20Q9P2F6 1191 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CDC42EP3Q9UKI2 254 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PSME2Q9UL46 239 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 MSRB2Q9Y3D2 182 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RBM8AQ9Y5S9 174 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CNTRLQ7Z7A1 2325 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TRIM64A6NGJ6 449 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TRIM77I1YAP6 450 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ORC4O43929 436 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CILPO75339 1184 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CSDE1O75534 798 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SRP72O76094 671 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 IL2RAP01589 272 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CD99P14209 185 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TAL1P17542 331 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 OR1E1P30953 314 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 EIF2S3P41091 472 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PSMD4P55036 377 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 NPEPPSP55786 919 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 IL2P60568 153 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 C1orf53Q5VUE5 145 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CMTM8Q8IZV2 173 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CPEB3Q8NE35 698 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 OR1N1Q8NGS0 311 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 FBXL20Q96IG2 436 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CLIC6Q96NY7 704 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RANBP17Q9H2T7 1088 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CYP4F12Q9HCS2 524 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 NPHS2Q9NP85 383 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 DDX28Q9NUL7 540 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 FAM198AQ9UFP1 575 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 FZD10Q9ULW2 581 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TMEM184BQ9Y519 407 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PCDHGA8Q9Y5G5 932 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 A0A087WUV0 522 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 H0YC42 278 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 K7ELQ4 463 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KPNA5O15131 536 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 MSH4O15457 936 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PRKAB2O43741 272 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KCNJ13O60928 360 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC25A12O75746 678 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CPNE6O95741 557 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ALDOBP05062 364 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ITGB3P05106 788 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CALB1P05937 261 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC8A1P32418 973 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KLHL30Q0D2K2 578 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PDE7AQ13946 482 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 BRD3Q15059 726 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 NSDHLQ15738 373 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 NIPA1Q7RTP0 329 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 NLRP9Q7RTR0 991 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC29A4Q7RTT9 530 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 EGFL6Q8IUX8 553 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 FBXL14Q8N1E6 418 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 EXD3Q8N9H8 876 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 XXYLT1Q8NBI6 393 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 OR4K17Q8NGC6 315 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SGIP1Q9BQI5 828 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SERHL2Q9H4I8 314 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ASB7Q9H672 318 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PIH1D3Q9NQM4 214 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ARMCX3Q9UH62 379 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 LIMA1Q9UHB6 759 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RPL26L1Q9UNX3 145 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 GOLGA8IPA6NC78 632 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 BRINP1O60477 761 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CCNT2O60583 730 aaKnown RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 RAMP2O60895 175 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PLEKHA8P1O95397 391 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CYP1A1P04798 512 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 HNRNPA2B1P22626 353 aaKnown RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 BDNFP23560 247 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 EIF4A3P38919 411 aaKnown RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PSMD7P51665 324 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CAPZA1P52907 286 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PNOCQ13519 176 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 P3H1Q32P28 736 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 TMPPEQ6ZT21 453 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 USP49Q70CQ1 688 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 RBM12BQ8IXT5 1001 aaKnown RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF100Q8IYN0 542 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PRSS58Q8IYP2 241 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF614Q8N883 585 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ATP6V1C2Q8NEY4 427 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ADCY4Q8NFM4 1077 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 KLK6Q92876 244 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 GJA10Q969M2 543 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 SDCCAG3Q96C92 435 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CNOT6LQ96LI5 555 aaKnown RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 HERPUD2Q9BSE4 406 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 FUT8Q9BYC5 575 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 L2HGDHQ9H9P8 463 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 SMYD2Q9NRG4 433 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IL20Q9NYY1 176 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 FNIP2Q9P278 1114 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ANKMY1Q9P2S6 941 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms