RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 C8orf59Q8N0T1 100 aaPredicted RBP10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 ST13P5Q8NFI4 369 aaPredicted RBP10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 OR4L1Q8NH43 312 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 WDR36Q8NI36 951 aaKnown RBP10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 UCMAQ8WVF2 138 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 TLCD1Q96CP7 247 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 PAWRQ96IZ0 340 aaKnown RBP10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 APOLD1Q96LR9 279 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 PCDHAC1Q9H158 963 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 GNEQ9Y223 722 aaKnown RBP10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
SEMA4D-208ENST00000422704 ARID1AO14497 2285 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ICE1Q9Y2F5 2266 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 C15orf38-AP3S2A0A0A6YYH1 394 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ADCY6O43306 1168 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 IGSF6O95976 241 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SERPINA4P29622 427 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 AXLP30530 894 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 GRM5P41594 1212 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 LILRA4P59901 499 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ACSBG2Q5FVE4 666 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SYPL2Q5VXT5 272 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 GPRIN3Q6ZVF9 776 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ARPINQ7Z6K5 226 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CLYBLQ8N0X4 340 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 RP9Q8TA86 221 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PSMA8Q8TAA3 256 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 DQX1Q8TE96 717 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 REXO5Q96IC2 774 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 HDHD2Q9H0R4 259 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 DTLQ9NZJ0 730 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 GGA2Q9UJY4 613 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 TRIM38O00635 465 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PPEF2O14830 753 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PLIN3O60664 434 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 EPN2O95208 641 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 VNN1O95497 513 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 IL1BP01584 269 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 UNGP13051 313 aaPredicted RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 NCK1P16333 377 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 YAP1P46937 504 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CASP9P55211 416 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SRP54P61011 504 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CSNK2BP67870 215 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CASP12Q6UXS9 341 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 B3GNT6Q6ZMB0 384 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 RPS27LQ71UM5 84 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 MTSS1LQ765P7 747 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ZNF540Q8NDQ6 660 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 MOCOSQ96EN8 888 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PCED1BQ96HM7 432 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 RPL10LQ96L21 214 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 OR52E6Q96RD3 313 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PDZD7Q9H5P4 517 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 FBXO10Q9UK96 956 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 AGO1Q9UL18 857 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 MTF2Q9Y483 593 aaPredicted RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 BAZ2AQ9UIF9 1905 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 DDX60LQ5H9U9 1706 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 GRIN2DO15399 1336 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 TRBV23OR9-2A0A075B6M9 112 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CCDC189A1A4V9 331 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 PPP2R1BP30154 601 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 HOXD13P35453 343 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ST13P50502 369 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 CLCN5P51795 746 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 RTP1P59025 263 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 MRPS6P82932 125 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SP2Q02086 613 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 C1DQ13901 141 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 NOMO2Q5JPE7 1267 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SPANXN2Q5MJ10 180 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ARMC3Q5W041 872 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ZNF57Q68EA5 555 aaPredicted RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 MAB21L3Q8N8X9 362 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 KAT2AQ92830 837 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 TADA1Q96BN2 335 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-208ENST00000422704 STX16-NPEPL1H3BU86 382 aa10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 TFECO14948 347 aaPredicted RBP10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 CATP04040 527 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 CKMT2P17540 419 aa10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 LPOP22079 712 aaPredicted RBP10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 GRIK3Q13003 919 aa10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 INSCQ1MX18 579 aa10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 MACC1Q6ZN28 852 aa10.61□□□□□ -0.71
SEMA4D-208ENST00000422704 HDDC2Q7Z4H3 204 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms