RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 HOXC4P09017 264 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 TMEM253P0C7T8 217 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 MX2P20592 715 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 CCNCP24863 283 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 TRIM23P36406 574 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 GPR1P46091 355 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 LSSP48449 732 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 CCL7P80098 99 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 DSC2Q02487 901 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 GBE1Q04446 702 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 GALNT2Q10471 571 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 SPIDRQ14159 915 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 ASTE1Q2TB18 679 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 TBC1D25Q3MII6 688 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RALGPS1Q5JS13 557 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RAET1GQ6H3X3 334 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 DOK6Q6PKX4 331 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 Q6ZVL8 140 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 TSPAN33Q86UF1 283 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 VSTM4Q8IW00 320 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 SDR16C5Q8N3Y7 309 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 KYQ8NBH2 561 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 FAM71BQ8TC56 605 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 PIH1D2Q8WWB5 315 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RAPGEF5Q92565 580 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 CCDC74AQ96AQ1 378 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 ZNF578Q96N58 590 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 RNF157Q96PX1 679 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RBM15Q96T37 977 aaKnown RBP eCLIP9.29□□□□□ -0.92
NUP50-206ENST00000422489 LGMNQ99538 433 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 DNAJC7Q99615 494 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 ZNF670Q9BS34 389 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 CARS2Q9HA77 564 aaKnown RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 FGF22Q9HCT0 170 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 ABHD10Q9NUJ1 306 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 HAUS2Q9NVX0 235 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 KCTD5Q9NXV2 234 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 LCMT1Q9UIC8 334 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 NENFQ9UMX5 172 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 SATB2Q9UPW6 733 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 CHKBQ9Y259 395 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 HEY1Q9Y5J3 304 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 ENTPD2Q9Y5L3 495 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 DGKBQ9Y6T7 804 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 KNL1Q8NG31 2342 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 NYNRINQ9P2P1 1898 aaKnown RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 DOCK4Q8N1I0 1966 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 LRRD1A4D1F6 860 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 EIF4E1BA6NMX2 242 aaKnown RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 B4DGG1 531 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 AKR1B15C9JRZ8 316 aaPredicted RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 TNFRSF10CO14798 259 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 CCNB1P14635 433 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 LHCGRP22888 699 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 CES1P23141 567 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 NOP2P46087 812 aaKnown RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 GNPDA1P46926 289 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 POLD2P49005 469 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 NIPAL4Q0D2K0 466 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 SLC10A2Q12908 348 aaPredicted RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 BIRC2Q13490 618 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 FAM182AQ5T1J6 154 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 MARK2Q7KZI7 788 aaKnown RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 HEATR4Q86WZ0 1026 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 RFX6Q8HWS3 928 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 SFTPA2Q8IWL1 248 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 CCDC13Q8IYE1 715 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 CBARPQ8N350 705 aaPredicted RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 PQLC3Q8N755 202 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 LPCAT1Q8NF37 534 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 WDR48Q8TAF3 677 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 MAML1Q92585 1016 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 DTD2Q96FN9 168 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 TSGA13Q96PP4 275 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 GFM1Q96RP9 751 aaKnown RBP9.28□□□□□ -0.92
NUP50-206ENST00000422489 ANP32EQ9BTT0 268 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 TEX101Q9BY14 249 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 ABCG8Q9H221 673 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 EPB41L5Q9HCM4 733 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 SEPT10Q9P0V9 454 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 LRIT1Q9P2V4 623 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 TMEM98Q9Y2Y6 226 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 PLXNB3Q9ULL4 1909 aa9.28□□□□□ -0.92
NUP50-206ENST00000422489 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 PRSS38A1L453 326 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 KCNK1O00180 336 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 PSMD11O00231 422 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 KLK10O43240 276 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 FZD6O60353 706 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 MFAP3LO75121 409 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 TCEA3O75764 348 aa9.27□□□□□ -0.93
NUP50-206ENST00000422489 TNFSF15O95150 251 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms