RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 KCTD3Q9Y597 815 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RNF103-CHMP3A0A140T963 221 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 MANSC4A6NHS7 340 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ZNF839A8K0R7 811 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 WASH4PA8MWX3 477 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 AP1G1O43747 822 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NDUFS3O75489 264 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR6B1O95007 311 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TBX18O95935 607 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PBX3P40426 434 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CASP2P42575 452 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GALNT3Q14435 633 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 MGAT5BQ3V5L5 792 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PARP15Q460N3 678 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FBXL22Q6P050 247 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ISCA2Q86U28 154 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ABI1Q8IZP0 508 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SLC39A3Q9BRY0 314 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OSBPL11Q9BXB4 747 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GSTO2Q9H4Y5 243 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NOL11Q9H8H0 719 aaKnown RBP11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 COQ10BQ9H8M1 238 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TLR8Q9NR97 1041 aaKnown RBP11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OLA1Q9NTK5 396 aaKnown RBP11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 UBAP1Q9NZ09 502 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NDUFAF1Q9Y375 327 aa11.71□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GOT2P00505 430 aaKnown RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ARSAP15289 507 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SLC7A1P30825 629 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NR1H2P55055 460 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 INHBCP55103 352 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 IL10RBQ08334 325 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 LRP8Q14114 963 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SPNS2Q8IVW8 549 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR4L1Q8NH43 312 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRPC4APQ8TEL6 797 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SEPT5Q99719 369 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CIB1Q99828 191 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TAS2R13Q9NYV9 303 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ARL5AQ9Y689 179 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 BBIP1A8MTZ0 92 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SIX3O95343 332 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GRIA2P42262 883 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GPR15P49685 360 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ACADVLP49748 655 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 AFMIDQ63HM1 303 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PRMT9Q6P2P2 845 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 B3GNT6Q6ZMB0 384 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FBXO39Q8N4B4 442 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ATAD1Q8NBU5 361 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 STAG3L4Q8TBR4 150 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TWIST2Q8WVJ9 160 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SBF1O95248 1867 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 UBXN8O00124 270 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TPST1O60507 370 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 RPP40O75818 363 aaKnown RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ASGR1P07306 291 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 LBPP18428 481 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PSMA4P25789 261 aaKnown RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 EIF4EBP2Q13542 120 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NADK2Q4G0N4 442 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PITRM1Q5JRX3 1037 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 IFNEQ86WN2 208 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 DTNBP1Q96EV8 351 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 HOPXQ9BPY8 73 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OSER1Q9NX31 292 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PLK2Q9NYY3 685 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 F5H5T6 163 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 RTN3O95197 1032 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 HGFP14210 728 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 YBEYP58557 167 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 RAD51Q06609 339 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 LPIN1Q14693 890 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TSPAN14Q8NG11 270 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR2T34Q8NGX1 318 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR2T3Q8NH03 318 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 BRSK1Q8TDC3 778 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CNOT11Q9UKZ1 510 aaKnown RBP11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CCDC162PA2VCL2 907 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FBP2O00757 339 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PIP5K1BO14986 540 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SNX2O60749 519 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TIPRLO75663 272 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PYGLP06737 847 aa11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PIM1P11309 404 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 VPS26BQ4G0F5 336 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms