RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SATB2Q9UPW6 733 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 PPIL1Q9Y3C6 166 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 RAI2Q9Y5P3 530 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 BAHCC1Q9P281 2608 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 EIF4E1BA6NMX2 242 aaKnown RBP25.35■■□□□ 1.65
VEGFA-208ENST00000417285 PGLSO95336 258 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 KRT7P08729 469 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 CD48P09326 243 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 MMRN1Q13201 1228 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 COL9A2Q14055 689 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-208ENST00000417285 DPYSL3Q14195 570 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 PDK2Q15119 407 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 CNGA3Q16281 694 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 C3orf38Q5JPI3 329 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 ARL14Q8N4G2 192 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 RNF214Q8ND24 703 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 FAM46DQ8NEK8 389 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 GPR156Q8NFN8 814 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 PDXPQ96GD0 296 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 ZNF670Q9BS34 389 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 DPH1Q9BZG8 443 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 FGF22Q9HCT0 170 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 PHPT1Q9NRX4 125 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-208ENST00000417285 ABHD10Q9NUJ1 306 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 RP1P56715 2156 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 KALRNO60229 2985 aa25.35■■□□□ 1.65
VEGFA-208ENST00000417285 TMEM253P0C7T8 217 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 MYCLP1P12525 358 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 ARSEP51690 589 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 UCNP55089 124 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 MAXP61244 160 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 TRAF2Q12933 501 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 ARHGEF7Q14155 803 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 PAFAH1B3Q15102 231 aaKnown RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 BROXQ5VW32 411 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 TIGD7Q6NT04 549 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 USP45Q70EL2 814 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 FATE1Q969F0 183 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 CCDC74AQ96AQ1 378 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 CCDC97Q96F63 343 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 GFM1Q96RP9 751 aaKnown RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 MCCC1Q96RQ3 725 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-208ENST00000417285 LGR4Q9BXB1 951 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 TEX101Q9BY14 249 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 CYP4F12Q9HCS2 524 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 NT5MQ9NPB1 228 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 AMACRQ9UHK6 382 aa25.34■■□□□ 1.65
VEGFA-208ENST00000417285 CCDC187A0A096LP49 1063 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 MATN3O15232 486 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 MFAP3LO75121 409 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 PNLIPP16233 465 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 GLB1P16278 677 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 TEAD1P28347 426 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 MAN1A1P33908 653 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 GARSP41250 739 aaKnown RBP25.33■■□□□ 1.65
VEGFA-208ENST00000417285 GALNT2Q10471 571 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 TCEA2Q15560 299 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 LRRK1Q38SD2 2015 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 ATP13A4Q4VNC1 1196 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 ANKRD20A8PQ5CZ79 823 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 NYAP1Q6ZVC0 841 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 GPR155Q7Z3F1 870 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 DTD2Q96FN9 168 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 FCRL3Q96P31 734 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-208ENST00000417285 TSGA13Q96PP4 275 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 POLR1EQ9GZS1 481 aaKnown RBP25.33■■□□□ 1.65
VEGFA-208ENST00000417285 TMEM168Q9H0V1 697 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 MOSPD1Q9UJG1 213 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 APPL1Q9UKG1 709 aa25.33■■□□□ 1.65
VEGFA-208ENST00000417285 TK2O00142 265 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 MFSD11O43934 449 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 CCNCP24863 283 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 ITKQ08881 620 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 EIF3IQ13347 325 aaKnown RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 IFI16Q16666 785 aaKnown RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 ZFYVE27Q5T4F4 411 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 DENND2CQ68D51 928 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 KCTD16Q68DU8 428 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 NCBP2-AS2Q69YL0 99 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 CPNE8Q86YQ8 564 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 LSM14AQ8ND56 463 aaKnown RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 PIH1D2Q8WWB5 315 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 KCNE4Q8WWG9 221 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 LIN37Q96GY3 246 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 CCDC42Q96M95 316 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 BBC3Q96PG8 261 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 SEMA3CQ99985 751 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 STRADBQ9C0K7 418 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 SYNDIG1Q9H7V2 258 aa25.32■■□□□ 1.64
VEGFA-208ENST00000417285 MRPL40Q9NQ50 206 aaKnown RBP25.32■■□□□ 1.64
VEGFA-208ENST00000417285 TEX51A0A1B0GUA7 166 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 A0A1W2PNU3 283 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-208ENST00000417285 PRSS38A1L453 326 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 NPIPB15A6NHN6 443 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-208ENST00000417285 ETV3P41162 512 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 TAS2R40P59535 323 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 CCL7P80098 99 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 DPTQ07507 201 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 CERCAMQ5T4B2 595 aa25.31■■□□□ 1.64
VEGFA-208ENST00000417285 HSD11B1LQ7Z5J1 315 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms