RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TMEM168Q9H0V1 697 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 WDR26Q9H7D7 661 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 SPTLC3Q9NUV7 552 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 UVRAGQ9P2Y5 699 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 PADI4Q9UM07 663 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ST14Q9Y5Y6 855 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 A0A1W2PQM1 296 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
UBXN4-203ENST00000416538 NOBOXO60393 691 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 MFAP3LO75121 409 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 DXOO77932 396 aaKnown RBP15.11■□□□□ 0.01
UBXN4-203ENST00000416538 HLA-DQB2P05538 268 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 BLKP51451 505 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 NIPAL4Q0D2K0 466 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 ELOCQ15369 112 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 HADHQ16836 314 aaKnown RBP15.11■□□□□ 0.01
UBXN4-203ENST00000416538 SPECC1LQ69YQ0 1117 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 PNCKQ6P2M8 343 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 Q6ZVL8 140 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 HEATR4Q86WZ0 1026 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 RNF214Q8ND24 703 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 GPR156Q8NFN8 814 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 ARRDC2Q8TBH0 407 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 NAT6Q93015 286 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 ABCG4Q9H172 646 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 ABHD10Q9NUJ1 306 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 EVA1BQ9NVM1 165 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 NCKIPSDQ9NZQ3 722 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 GULP1Q9UBP9 304 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 PHTF1Q9UMS5 762 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 GPR34Q9UPC5 381 aa15.11■□□□□ 0.01
UBXN4-203ENST00000416538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■□□□□ 9
UBXN4-203ENST00000416538 MGAQ8IWI9 3026 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 SSU72P8A0A1W2PR75 194 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 PRSS38A1L453 326 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 C3orf70A6NLC5 250 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 CACNB4O00305 520 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 PRLP01236 227 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 H2AFZP0C0S5 128 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 MYCLP1P12525 358 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 CTSEP14091 401 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 MAN1A1P33908 653 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 POLR2LP62875 67 aaKnown RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 CCDC173Q0VFZ6 552 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 ARMC12Q5T9G4 340 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 RBM44Q6ZP01 1051 aaKnown RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 H2AFVQ71UI9 128 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 TECPR1Q7Z6L1 1165 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 SPACA3Q8IXA5 215 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 SDR16C5Q8N3Y7 309 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 PLD5Q8N7P1 536 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 CTNNBL1Q8WYA6 563 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 FGF11Q92914 225 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 SCRN2Q96FV2 425 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 TEX101Q9BY14 249 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 FRMD8Q9BZ67 464 aaPredicted RBP15.1■□□□□ 0.01
UBXN4-203ENST00000416538 SYNDIG1Q9H7V2 258 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 POLR1BQ9H9Y6 1135 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 CYP4F12Q9HCS2 524 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 DTLQ9NZJ0 730 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 PPIL1Q9Y3C6 166 aa15.1■□□□□ 0.01
UBXN4-203ENST00000416538 D6RAR5 112 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 TNFP01375 233 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 CEACAM5P06731 702 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 MMP2P08253 660 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 ACTN2P35609 894 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 LSSP48449 732 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 RPIAP49247 311 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 CDK3Q00526 305 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 TLE3Q04726 772 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 ZBTB17Q13105 803 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 MESDQ14696 234 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 RALGPS1Q5JS13 557 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 LRRC66Q68CR7 880 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 LVRNQ6Q4G3 990 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 GKN2Q86XP6 184 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 NRROSQ86YC3 692 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 BBS5Q8N3I7 341 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 OR8K1Q8NGG5 319 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 NAF1Q96HR8 494 aaKnown RBP15.09■□□□□ 0.01
UBXN4-203ENST00000416538 TSGA13Q96PP4 275 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 TDRD1Q9BXT4 1180 aaKnown RBP15.09■□□□□ 0.01
UBXN4-203ENST00000416538 POLR1EQ9GZS1 481 aaKnown RBP15.09■□□□□ 0.01
UBXN4-203ENST00000416538 PRORYQ9H606 182 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 SUDS3Q9H7L9 328 aaPredicted RBP15.09■□□□□ 0.01
UBXN4-203ENST00000416538 CD84Q9UIB8 345 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 DOLKQ9UPQ8 538 aa15.09■□□□□ 0.01
UBXN4-203ENST00000416538 A0A0J9YYE9 177 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 A0A1W2PQ67 120 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 B4DGG1 531 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 PSMD11O00231 422 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TNFRSF10CO14798 259 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 MATN3O15232 486 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TCEA3O75764 348 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 TRBC1P01850 177 aa15.08■□□□□ 0
UBXN4-203ENST00000416538 CYP2A6P11509 494 aaPredicted RBP15.08■□□□□ 0
UBXN4-203ENST00000416538 KDELR1P24390 212 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms