RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ATXN7L2Q5T6C5 722 aaPredicted RBP10□□□□□ -0.81
DDB1-202ENST00000414411 DPY19L3Q6ZPD9 716 aa10□□□□□ -0.81
DDB1-202ENST00000414411 Q6ZVU0 165 aa10□□□□□ -0.81
DDB1-202ENST00000414411 CTAGE3PQ8IX95 158 aa10□□□□□ -0.81
DDB1-202ENST00000414411 CHPFQ8IZ52 775 aa10□□□□□ -0.81
DDB1-202ENST00000414411 ZNF366Q8N895 744 aa10□□□□□ -0.81
DDB1-202ENST00000414411 OR2AP1Q8NGE2 309 aa10□□□□□ -0.81
DDB1-202ENST00000414411 ZNF398Q8TD17 642 aa10□□□□□ -0.81
DDB1-202ENST00000414411 CLDN23Q96B33 292 aa10□□□□□ -0.81
DDB1-202ENST00000414411 ERP27Q96DN0 273 aa10□□□□□ -0.81
DDB1-202ENST00000414411 EXOC2Q96KP1 924 aa10□□□□□ -0.81
DDB1-202ENST00000414411 LRRC37BQ96QE4 947 aa10□□□□□ -0.81
DDB1-202ENST00000414411 FCRL5Q96RD9 977 aa10□□□□□ -0.81
DDB1-202ENST00000414411 NUDCD1Q96RS6 583 aa10□□□□□ -0.81
DDB1-202ENST00000414411 EBNA1BP2Q99848 306 aaKnown RBP10□□□□□ -0.81
DDB1-202ENST00000414411 SEMA3CQ99985 751 aa10□□□□□ -0.81
DDB1-202ENST00000414411 TM6SF2Q9BZW4 377 aa10□□□□□ -0.81
DDB1-202ENST00000414411 FOXQ1Q9C009 403 aa10□□□□□ -0.81
DDB1-202ENST00000414411 MYLK2Q9H1R3 596 aa10□□□□□ -0.81
DDB1-202ENST00000414411 GBA3Q9H227 469 aa10□□□□□ -0.81
DDB1-202ENST00000414411 TBC1D17Q9HA65 648 aa10□□□□□ -0.81
DDB1-202ENST00000414411 LMAN1LQ9HAT1 526 aa10□□□□□ -0.81
DDB1-202ENST00000414411 NOD2Q9HC29 1040 aa10□□□□□ -0.81
DDB1-202ENST00000414411 PRSS16Q9NQE7 514 aa10□□□□□ -0.81
DDB1-202ENST00000414411 SMYD2Q9NRG4 433 aa10□□□□□ -0.81
DDB1-202ENST00000414411 SUN2Q9UH99 717 aa10□□□□□ -0.81
DDB1-202ENST00000414411 SLC8A2Q9UPR5 921 aa10□□□□□ -0.81
DDB1-202ENST00000414411 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
DDB1-202ENST00000414411 EDDM13A0A1B0GTR0 161 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 WDR91A4D1P6 747 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 FAM159BA6NKW6 160 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 INSIG1O15503 277 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 POP4O95707 220 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 SNRPAP09012 282 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 NFKB1P19838 968 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SCNN1BP51168 640 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SNRPD1P62314 119 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 CDK16Q00536 496 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 DSC2Q02487 901 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 UBXN2BQ14CS0 331 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 RALGPS1Q5JS13 557 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 ITPRIPL1Q6GPH6 555 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 PKN3Q6P5Z2 889 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 NCEH1Q6PIU2 408 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 MPP5Q8N3R9 675 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TXNDC5Q8NBS9 432 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 GSDMBQ8TAX9 411 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 MAGEC3Q8TD91 643 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 OXNAD1Q96HP4 312 aaPredicted RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 FAM111AQ96PZ2 611 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CPEB1Q9BZB8 566 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 MANSC1Q9H8J5 431 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TXLNGQ9NUQ3 528 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 HECAQ9UBI9 543 aaPredicted RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 MAD1L1Q9Y6D9 718 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 A0A1W2PQF6 199 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CHURC1-FNTBB4DL54 471 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SIN3BO75182 1162 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 KLF8O95600 359 aaPredicted RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 IGSF6O95976 241 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 EPHX1P07099 455 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TROVE2P10155 538 aaKnown RBP eCLIP9.99□□□□□ -0.81
DDB1-202ENST00000414411 MLNP12872 115 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 PSMB4P28070 264 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 FDFT1P37268 417 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CCNFP41002 786 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 GRIA1P42261 906 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CCNHP51946 323 aaPredicted RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 LRRC32Q14392 662 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 GAS6Q14393 721 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SLC14A2Q15849 920 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 LGSNQ5TDP6 509 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 KCTD11Q693B1 232 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TRMT10BQ6PF06 316 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 Q6ZS52 159 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TRMT11Q7Z4G4 463 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 KIF2BQ8N4N8 673 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CHST14Q8NCH0 376 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 PJA1Q8NG27 643 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SPATA22Q8NHS9 363 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 RPLP0P6Q8NHW5 317 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 SRPK1Q96SB4 655 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 TRIM56Q9BRZ2 755 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 NPHS2Q9NP85 383 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 EIF2B3Q9NR50 452 aaKnown RBP9.99□□□□□ -0.81
DDB1-202ENST00000414411 VPS45Q9NRW7 570 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 MKS1Q9NXB0 559 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 CACNA1IQ9P0X4 2223 aa9.99□□□□□ -0.81
DDB1-202ENST00000414411 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
DDB1-202ENST00000414411 COPEO14579 308 aa9.98□□□□□ -0.81
DDB1-202ENST00000414411 UGT1A9O60656 530 aa9.98□□□□□ -0.81
DDB1-202ENST00000414411 RFPL1O75677 317 aa9.98□□□□□ -0.81
DDB1-202ENST00000414411 ATP5HO75947 161 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms