RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CDT1Q9H211 546 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ARL8BQ9NVJ2 186 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TAS2R14Q9NYV8 317 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TAS2R1Q9NYW7 299 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 HEY2Q9UBP5 337 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TCRBV7S2A1N4TA0A589 114 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 NCF1BA6NI72 391 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ACOD1A6NK06 481 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 NCF1CA8MVU1 366 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 E2F3O00716 465 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 EXTL3O43909 919 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TBC1D4O60343 1298 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 B4GALT4O60513 344 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 OPHN1O60890 802 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ATP6V1G1O75348 118 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 PPM1BO75688 479 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 PIGRP01833 764 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CHRNA1P02708 482 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ITGAVP06756 1048 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 PRR35P0CG20 571 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 HSPA8P11142 646 aaKnown RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 MAGEA4P43358 317 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 DHPSP49366 369 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 KPNA1P52294 538 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CDK16Q00536 496 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 MED21Q13503 144 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 MORF4L2Q15014 288 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 DPYSL2Q16555 572 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CFAP157Q5JU67 520 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 AAGABQ6PD74 315 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 MAMDC2Q7Z304 686 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ANKS1BQ7Z6G8 1248 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 OR5B17Q8NGF7 314 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 WDR60Q8WVS4 1066 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 SEMA4DQ92854 862 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 KAT5Q92993 513 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 FBXL18Q96ME1 805 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 GPR88Q9GZN0 384 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TMEM117Q9H0C3 514 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 GORASP2Q9H8Y8 452 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 SNX15Q9NRS6 342 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 SLC35D1Q9NTN3 355 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CCM2LQ9NUG4 571 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 UVRAGQ9P2Y5 699 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 SLC24A2Q9UI40 661 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CDY2AQ9Y6F7 541 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 STYXL1Q9Y6J8 313 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CNTNAP2Q9UHC6 1331 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 RNF103-CHMP3A0A140T963 221 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 RNF103O00237 685 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 SMAD6O43541 496 aaKnown RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 TYROBPO43914 113 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 ZC3H11AO75152 810 aaKnown RBP eCLIP9.43□□□□□ -0.94e-20■■■■■ 59.1
SNHG3-201ENST00000413987 CRTAMO95727 393 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 PRG2P13727 222 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 DARSP14868 501 aaKnown RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 CHRNB2P17787 502 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 C5AR1P21730 350 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 PROZP22891 400 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 RPA3P35244 121 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 GP5P40197 560 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 GBX2P52951 348 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 NKX3-2P78367 333 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 MYL7Q01449 175 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 CYLC2Q14093 348 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 FUT11Q495W5 492 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 DNAL1Q4LDG9 190 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 ZCCHC12Q6PEW1 402 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 MPZL3Q6UWV2 235 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 SERINC5Q86VE9 423 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 STT3BQ8TCJ2 826 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 C1orf54Q8WWF1 131 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 GLT1D1Q96MS3 346 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 APOL6Q9BWW8 343 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 TIMMDC1Q9NPL8 285 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 NDFIP2Q9NV92 336 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 GDAP2Q9NXN4 497 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 KLHL20Q9Y2M5 609 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 NPFFR2Q9Y5X5 522 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 TM9SF1O15321 606 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 YKT6O15498 198 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 HNRNPRO43390 633 aaKnown RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 RB1P06400 928 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 CSF1P09603 554 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 TNNI1P19237 187 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 ADRA1BP35368 520 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 BUD31P41223 144 aaPredicted RBP9.43□□□□□ -0.9
SNHG3-201ENST00000413987 CCT8P50990 548 aa9.43□□□□□ -0.9
SNHG3-201ENST00000413987 LUMP51884 338 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms