RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 WDR26Q9H7D7 661 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 GPN2Q9H9Y4 310 aaPredicted RBP9.58□□□□□ -0.88
RFFL-203ENST00000413582 LRRC4CQ9HCJ2 640 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 CYP4F12Q9HCS2 524 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 FANCLQ9NW38 375 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 TMEM9Q9P0T7 183 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 PLEKHB1Q9UF11 243 aaPredicted RBP9.58□□□□□ -0.88
RFFL-203ENST00000413582 DNAJC12Q9UKB3 198 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 PILRAQ9UKJ1 303 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 SHANK1Q9Y566 2161 aa9.58□□□□□ -0.88
RFFL-203ENST00000413582 ANKRD17O75179 2603 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 IGHV1OR21-1A0A087WYE8 117 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 CFAP69A5D8W1 941 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 PRR19A6NJB7 356 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 B4E171 279 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 BUB1BO60566 1050 aaPredicted RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 ECEL1O95672 775 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 LSM8O95777 96 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 FGF1P05230 155 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 PLEKP08567 350 aaPredicted RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 CDK11BP21127 795 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 CSTF2P33240 577 aaKnown RBP eCLIP9.57□□□□□ -0.88
RFFL-203ENST00000413582 TSPAN7P41732 249 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 STAT1P42224 750 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 GPR3P46089 330 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 RAB15P59190 212 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 KLRB1Q12918 225 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 GRM3Q14832 879 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 CYTH1Q15438 398 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 HSP90AA4PQ58FG1 418 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 DCAF12Q5T6F0 453 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 ATP1A1-AS1Q5TC04 95 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 NKAIN2Q5VXU1 208 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 ANKS6Q68DC2 871 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 LIPIQ6XZB0 460 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 ATCAYQ86WG3 371 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 FAM129CQ86XR2 697 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 DNAAF5Q86Y56 855 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 CCDC185Q8N715 623 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 RTP4Q96DX8 246 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 ZNF641Q96N77 438 aaPredicted RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 ASPSCR1Q9BZE9 553 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 SPRY4Q9C004 299 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 HSD3B7Q9H2F3 369 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 PDCL3Q9H2J4 239 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 CARS2Q9HA77 564 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 SAMSN1Q9NSI8 373 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 OCIAD1Q9NX40 245 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 SLC39A1Q9NY26 324 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 TAAR2Q9P1P5 351 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 LIMA1Q9UHB6 759 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 MOSPD1Q9UJG1 213 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 TP53TG5Q9Y2B4 290 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
RFFL-203ENST00000413582 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
RFFL-203ENST00000413582 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 EFCAB7A8K855 629 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 RASA4BC9J798 803 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 ZW10O43264 779 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 RASA4O43374 803 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 FUCA1P04066 466 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 TPM3P06753 285 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 ELFN1P0C7U0 828 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 MYCLP1P12525 358 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 NR1D1P20393 614 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 MPSTP25325 297 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 AK4P27144 223 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 SDC4P31431 198 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 RGRP47804 291 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 UQCRFS1P47985 274 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 HDAC4P56524 1084 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 BPIFB4P59827 614 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NOMO3P69849 1222 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 ILF3Q12906 894 aaKnown RBP eCLIP9.56□□□□□ -0.88
RFFL-203ENST00000413582 SQSTM1Q13501 440 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 DEFB109BQ30KR1 87 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 PARP15Q460N3 678 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 CCDC14Q49A88 953 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 CFAP58Q5T655 872 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 TAF3Q5VWG9 929 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NAA35Q5VZE5 725 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 AFMIDQ63HM1 303 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 DPY19L2P1Q6NXN4 242 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 DPPA4Q7L190 304 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 CAMK1DQ8IU85 385 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 UNC5BQ8IZJ1 945 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NLGN4XQ8N0W4 816 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NAGSQ8N159 534 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 MSANTD4Q8NCY6 345 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NLGN4YQ8NFZ3 816 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 RXFP2Q8WXD0 754 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 STARD8Q92502 1023 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 NTAN1Q96AB6 310 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 KIAA1143Q96AT1 154 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 ECHDC3Q96DC8 303 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 TEFMQ96QE5 360 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms