RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PAPD5Q8NDF8 572 aaKnown RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ZMIZ2Q8NF64 920 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 TSPEARQ8WU66 669 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 CYGBQ8WWM9 190 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ZNF419Q96HQ0 510 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 MRGPRX2Q96LB1 330 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 OSMRQ99650 979 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ERVK-6Q9BXR3 956 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 PAIP1Q9H074 479 aaKnown RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 FAM49AQ9H0Q0 323 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 SMPD3Q9NY59 655 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 GPRC5DQ9NZD1 345 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 OAZ3Q9UMX2 235 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 TDRKHQ9Y2W6 561 aaKnown RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 VWA7Q9Y334 891 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ATP6AP2A0A1C7CYW4 349 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 HHLA1C9JL84 531 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 TNPO2O14787 897 aaKnown RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ATP6AP2O75787 350 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 UMPSP11172 480 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 CAPN3P20807 821 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 SLC6A2P23975 617 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 HOXC13P31276 330 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 TIGD7Q6NT04 549 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 ANKRD49Q8WVL7 239 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 HDAC10Q969S8 669 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 OTUD5Q96G74 571 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 LRCH3Q96II8 777 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 SEZ6LQ9BYH1 1024 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 POLR1BQ9H9Y6 1135 aa17.65■□□□□ 0.42
SDCBP-202ENST00000413219 COL4A4P53420 1690 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-202ENST00000413219 FGF10O15520 208 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-202ENST00000413219 COQ9O75208 318 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PMPCBO75439 489 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-202ENST00000413219 UGT1A6P19224 532 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 VARSP26640 1264 aaKnown RBP17.64■□□□□ 0.41
SDCBP-202ENST00000413219 RFC2P35250 354 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 CHRNA4P43681 627 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 C21orf59P57076 290 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 NAA20P61599 178 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 MOGQ16653 247 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF789Q5FWF6 425 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 GPR107Q5VW38 600 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 USP51Q70EK9 711 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 TAC4Q86UU9 113 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PTRH1Q86Y79 214 aaKnown RBP17.64■□□□□ 0.41
SDCBP-202ENST00000413219 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 LEMD2Q8NC56 503 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 DDHD1Q8NEL9 900 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 EDEM1Q92611 657 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 LRRC58Q96CX6 371 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 TRIM54Q9BYV2 358 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PKD2L2Q9NZM6 624 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PIN4Q9Y237 131 aaKnown RBP17.64■□□□□ 0.41
SDCBP-202ENST00000413219 PCDHA9Q9Y5H5 950 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 NUP205Q92621 2012 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 OTOFQ9HC10 1997 aa17.64■□□□□ 0.41
SDCBP-202ENST00000413219 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 SEC24DO94855 1032 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 MT-CO1P00395 513 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 HLA-DQB2P05538 268 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 LHX1P48742 406 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 HLCSP50747 726 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 PHEXP78562 749 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF792Q3KQV3 632 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 VPS26BQ4G0F5 336 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 PDCD4Q53EL6 469 aaKnown RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 AARS2Q5JTZ9 985 aaKnown RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 UBXN11Q5T124 520 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ISCA2Q86U28 154 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 PHYKPLQ8IUZ5 450 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 TBC1D21Q8IYX1 336 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM86AQ8N2M4 240 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 RNF34Q969K3 372 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 FBXL20Q96IG2 436 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 PLEKHA8Q96JA3 519 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ALG9Q9H6U8 611 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ELP3Q9H9T3 547 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 SDR39U1Q9NRG7 319 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 SLC38A7Q9NVC3 462 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 INTS10Q9NVR2 710 aaKnown RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 EGFL7Q9UHF1 273 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF639Q9UID6 485 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 DNAJC15Q9Y5T4 150 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 MYLKQ15746 1914 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 SMIM35A0A1B0GVV1 85 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 A0A1W2PPW3 197 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 SLC7A4O43246 635 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 NOL3O60936 208 aaKnown RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 CPNE6O95741 557 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 IDO1P14902 403 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 OXTRP30559 389 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 RPS9P46781 194 aaKnown RBP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 RABGGTBP53611 331 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms