RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RAB11FIP2Q7L804 512 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 CLEC14AQ86T13 490 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 NLRP8Q86W28 1048 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 MAP7D3Q8IWC1 876 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 FBXO39Q8N4B4 442 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 TEX26Q8N6G2 289 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 KYQ8NBH2 561 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 FAM71BQ8TC56 605 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 KIAA1524Q8TCG1 905 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 CPLX3Q8WVH0 158 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 SNRNP27Q8WVK2 155 aaKnown RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 NUS1Q96E22 293 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 NUP85Q9BW27 656 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 LGR4Q9BXB1 951 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 TMEM168Q9H0V1 697 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 CBX8Q9HC52 389 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 FGF22Q9HCT0 170 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 TRNAU1APQ9NX07 287 aaKnown RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 LRIT1Q9P2V4 623 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 MOSPD1Q9UJG1 213 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 ANAPC7Q9UJX3 599 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 PCDHGA7Q9Y5G6 932 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 FASNP49327 2511 aaKnown RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 A0A087X0T9 212 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 PRSS38A1L453 326 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 ERVH48-1M5A8F1 160 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 PLD2O14939 933 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 NUDT21O43809 227 aaKnown RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 PGLSO95336 258 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 RPLP0P05388 317 aaKnown RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 FAM228BP0C875 321 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 TCF4P15884 667 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 CCKBRP32239 447 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 DPTQ07507 201 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 CNGA3Q16281 694 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 C14orf28Q4W4Y0 310 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 CERCAMQ5T4B2 595 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 TIGD7Q6NT04 549 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 USP45Q70EL2 814 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 RAVER1Q8IY67 606 aaKnown RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 PGBD5Q8N414 524 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 GPBAR1Q8TDU6 330 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 FATE1Q969F0 183 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 PDXPQ96GD0 296 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 GSDMCQ9BYG8 508 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 SYNDIG1Q9H7V2 258 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 MRPL40Q9NQ50 206 aaKnown RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
MCF2L-210ENST00000409954 RABGEF1Q9UJ41 708 aa14.52□□□□□ -0.09
MCF2L-210ENST00000409954 IGSF10Q6WRI0 2623 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 A0A1W2PQM1 296 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 TTC24A2A3L6 582 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 D6RAR5 112 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 MATN3O15232 486 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 NOBOXO60393 691 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 PYGLP06737 847 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CCNB1P14635 433 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CCNCP24863 283 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 SSR1P43307 286 aaKnown RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 SLC25A11Q02978 314 aaKnown RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 ZFP36L1Q07352 338 aaKnown RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 ITKQ08881 620 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 ILF3Q12906 894 aaKnown RBP eCLIP14.51□□□□□ -0.091e-6■■■■□ 19.7
MCF2L-210ENST00000409954 HLTFQ14527 1009 aaKnown RBP eCLIP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 PDK2Q15119 407 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CLPPQ16740 277 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 TXNRD3NBQ6F5E7 133 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 Q6ZVL8 140 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 LUZP1Q86V48 1076 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CCNJLQ8IV13 435 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 KCTD6Q8NC69 237 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 PIH1D2Q8WWB5 315 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 DTD2Q96FN9 168 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 TSGA13Q96PP4 275 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 MCCC1Q96RQ3 725 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 POLR1EQ9GZS1 481 aaKnown RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CARS2Q9HA77 564 aaKnown RBP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 DNPEPQ9ULA0 475 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.51□□□□□ -0.09
MCF2L-210ENST00000409954 NBEAQ8NFP9 2946 aa14.51□□□□□ -0.09
MCF2L-210ENST00000409954 CELSR3Q9NYQ7 3312 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 NVLO15381 856 aaKnown RBP14.5□□□□□ -0.09
MCF2L-210ENST00000409954 CEACAM5P06731 702 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 TPM3P06753 285 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 ZNF30P17039 623 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 UGT1A5P35504 534 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 ETV3P41162 512 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 GARSP41250 739 aaKnown RBP14.5□□□□□ -0.09
MCF2L-210ENST00000409954 PDX1P52945 283 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 MAXP61244 160 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 TRAF2Q12933 501 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 PAFAH1B3Q15102 231 aaKnown RBP14.5□□□□□ -0.09
MCF2L-210ENST00000409954 TCEA2Q15560 299 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 IFI16Q16666 785 aaKnown RBP14.5□□□□□ -0.09
MCF2L-210ENST00000409954 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
MCF2L-210ENST00000409954 ARHGAP40Q5TG30 622 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 DENND2CQ68D51 928 aa14.5□□□□□ -0.09
MCF2L-210ENST00000409954 KCTD16Q68DU8 428 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms