RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OPRD1P41143 372 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 LEPRP48357 1165 aaKnown RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CSRP3P50461 194 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 PGGT1BP53609 377 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CDKN3Q16667 212 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GALNT7Q86SF2 657 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 PLPP6Q8IY26 295 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 MICALL1Q8N3F8 863 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF366Q8N895 744 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 SMRP1Q8NCR6 262 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GPR150Q8NGU9 434 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 OR4L1Q8NH43 312 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 BCAS4Q8TDM0 211 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CHFRQ96EP1 664 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CHMP6Q96FZ7 201 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 MAGEB18Q96M61 343 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GPR63Q9BZJ6 419 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 VPS11Q9H270 941 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 ELOVL2Q9NXB9 296 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 TMEM265A0A087WTH1 108 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 A0A096LPK6 155 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 NPIPB15A6NHN6 443 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 STX7O15400 261 aaKnown RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 ECI2O75521 394 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 SAT1P21673 171 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 IGFBP4P22692 258 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GDI1P31150 447 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 HNF1BP35680 557 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 RECQLP46063 649 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 IRF9Q00978 393 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 RAD51Q06609 339 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 USP10Q14694 798 aaKnown RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 TERB1Q8NA31 727 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF641Q96N77 438 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 NDNQ99608 321 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 IL17CQ9P0M4 197 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 WASF2Q9Y6W5 498 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 C1orf232A0A0U1RR37 186 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 TCP11X1B4DZS4 312 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 ARNTLO00327 626 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 GLRA3O75311 464 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 S1PR4O95977 384 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 MPOP05164 745 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 CTSLP07711 333 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 POU3F3P20264 500 aaPredicted RBP14.06□□□□□ -0.16
GPNMB-203ENST00000409458 OGNP20774 298 aaKnown RBP14.06□□□□□ -0.16
GPNMB-203ENST00000409458 DRD4P21917 467 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 MC4RP32245 332 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 HADHAP40939 763 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 CCT5P48643 541 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 PEX6Q13608 980 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF460Q14592 562 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 PDK4Q16654 411 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 TYSND1Q2T9J0 566 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 GDPD4Q6W3E5 623 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 TSPAN33Q86UF1 283 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
GPNMB-203ENST00000409458 KLHL32Q96NJ5 620 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 CCT8L2Q96SF2 557 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 HEPHQ9BQS7 1158 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 EMCNQ9ULC0 261 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 PHTF1Q9UMS5 762 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 SLC8A2Q9UPR5 921 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
GPNMB-203ENST00000409458 USP15Q9Y4E8 981 aaPredicted RBP14.06□□□□□ -0.16
GPNMB-203ENST00000409458 NUMBLQ9Y6R0 609 aa14.06□□□□□ -0.16
GPNMB-203ENST00000409458 WDR91A4D1P6 747 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 H7C0S8 307 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 LEFTY1O75610 366 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CLDN7O95471 211 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 FAM107AO95990 144 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 C2P06681 752 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 TAC1P20366 129 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 HMGCLP35914 325 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 SERPINB4P48594 390 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CDKN1CP49918 316 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CLCN5P51795 746 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 STC1P52823 247 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ST8SIA6P61647 398 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 SEMG2Q02383 582 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 EIF4HQ15056 248 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ZKSCAN8Q15776 578 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 FNDC3BQ53EP0 1204 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 FASTKD1Q53R41 847 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 LRRC73Q5JTD7 316 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 N4BP2L1Q5TBK1 243 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 C16orf46Q6P387 395 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CLEC14AQ86T13 490 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CEP97Q8IW35 865 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ARMC2Q8NEN0 867 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF473Q8WTR7 871 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms