RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 CLDN7O95471 211 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TBC1D3HP0C7X1 549 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 PTPN5P54829 565 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 ADPRHP54922 357 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 RPS21P63220 83 aaKnown RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 PRAMEP78395 509 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 CRADDP78560 199 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 ACOX1Q15067 660 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 CNGA3Q16281 694 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 MSS51Q4VC12 460 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 USP39Q53GS9 565 aaKnown RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TBC1D3GQ6DHY5 549 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TBC1D3CQ6IPX1 549 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 LIPIQ6XZB0 460 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 FAM124AQ86V42 546 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 ANKMY2Q8IV38 441 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 C1orf210Q8IVY1 113 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 GSPT2Q8IYD1 628 aaKnown RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TBC1D3Q8IZP1 549 aaPredicted RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 MPP5Q8N3R9 675 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 TTC30BQ8N4P2 665 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 OR2T34Q8NGX1 318 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 AENQ8WTP8 325 aaKnown RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 ZNF669Q96BR6 464 aaPredicted RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 PWWP2AQ96N64 755 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 CHRAC1Q9NRG0 131 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 POLR3BQ9NW08 1133 aaPredicted RBP15.28■□□□□ 0.04
AP1S3-204ENST00000409375 SERGEFQ9UGK8 458 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 APPL1Q9UKG1 709 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 CYP8B1Q9UNU6 501 aa15.28■□□□□ 0.04
AP1S3-204ENST00000409375 MROH6A6NGR9 719 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 A8MX80 341 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 K7ESF4 209 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 TM7SF2O76062 418 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 CD6P30203 668 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 LIG3P49916 1009 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 STC1P52823 247 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 PMS2P54278 862 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 RALGDSQ12967 914 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 SLC36A4Q6YBV0 504 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 TMEM135Q86UB9 458 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 TSPAN33Q86UF1 283 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 C11orf74Q86VG3 221 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 NRSN1Q8IZ57 195 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 CBARPQ8N350 705 aaPredicted RBP15.27■□□□□ 0.04
AP1S3-204ENST00000409375 DTWD2Q8NBA8 298 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
AP1S3-204ENST00000409375 ANKRD7Q92527 254 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 CAVIN3Q969G5 261 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 CFAP36Q96G28 342 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 PLEKHG4BQ96PX9 1271 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 WRAP53Q9BUR4 548 aaKnown RBP15.27■□□□□ 0.04
AP1S3-204ENST00000409375 TXLNGYQ9BZA5 131 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 TPSD1Q9BZJ3 242 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 PCED1AQ9H1Q7 454 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 PRMT8Q9NR22 394 aaPredicted RBP15.27■□□□□ 0.04
AP1S3-204ENST00000409375 NLE1Q9NVX2 485 aaPredicted RBP15.27■□□□□ 0.04
AP1S3-204ENST00000409375 C2orf42Q9NWW7 574 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 IL17CQ9P0M4 197 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 FBXO4Q9UKT5 387 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 ITM2BQ9Y287 266 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 ARL5AQ9Y689 179 aa15.27■□□□□ 0.04
AP1S3-204ENST00000409375 WNT9AO14904 365 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 NDUFS2O75306 463 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 BANF1O75531 89 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 RPP40O75818 363 aaKnown RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 SEMA4FO95754 770 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 PYGLP06737 847 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 FAM153BP0C7A2 387 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 LHCGRP22888 699 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 NUDT1P36639 197 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 SPAM1P38567 509 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 ZNF140P52738 457 aaPredicted RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 TAS2R38P59533 333 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 ACVR1Q04771 509 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 SGCGQ13326 291 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 CRYMQ14894 314 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 CDKN3Q16667 212 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 MAP7D1Q3KQU3 841 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 FAM153CQ494X1 144 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 ANKRD20A4Q4UJ75 823 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 SPDYCQ5MJ68 293 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 HP1BP3Q5SSJ5 553 aaPredicted RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 KIAA0930Q6ICG6 404 aaPredicted RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 TMEM105Q8N8V8 129 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 GSDMBQ8TAX9 411 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 C9orf72Q96LT7 481 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 SMIM14Q96QK8 99 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 CDC42EP4Q9H3Q1 356 aaKnown RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 VPS37BQ9H9H4 285 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 NFKBIL1Q9UBC1 381 aaPredicted RBP15.26■□□□□ 0.03
AP1S3-204ENST00000409375 FAM169AQ9Y6X4 670 aa15.26■□□□□ 0.03
AP1S3-204ENST00000409375 PRR23AA6NEV1 266 aa15.25■□□□□ 0.03
AP1S3-204ENST00000409375 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms