RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 TRIM65Q6PJ69 517 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 CEACAM20Q6UY09 585 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 ZNF354CQ86Y25 554 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 HCAR2Q8TDS4 363 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 SUV39H2Q9H5I1 410 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 RFPL1O75677 317 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 LRIG2O94898 1065 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 KRT9P35527 623 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 GABRB2P47870 512 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 MARSP56192 900 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 GPLD1P80108 840 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 INO80DQ53TQ3 878 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 LIPIQ6XZB0 460 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 ZPBPQ9BS86 351 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 TRNAU1APQ9NX07 287 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 TLK1Q9UKI8 766 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 RPS6KL1Q9Y6S9 549 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 OTOGQ6ZRI0 2925 aa12.86□□□□□ -0.35
CHRNA1-203ENST00000409219 CFAP69A5D8W1 941 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 A8MU76 341 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 TEX33O43247 280 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 DDAH2O95865 285 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 MYCLP1P12525 358 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ELAVL4P26378 380 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PTK2Q05397 1052 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ZNF761Q86XN6 746 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 DNAAF5Q86Y56 855 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ESX1Q8N693 406 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CASS4Q9NQ75 786 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 FBXO8Q9NRD0 319 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 TMEM59LQ9UK28 342 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 AJAP1Q9UKB5 411 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 POLHQ9Y253 713 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CEACAM5P06731 702 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ELFN1P0C7U0 828 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PNMA6AP0CW24 399 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SLC9A1P19634 815 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CDH5P33151 784 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 MAN1A1P33908 653 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ADRA1BP35368 520 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 GNPDA1P46926 289 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PMS2P54278 862 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ATP11AP98196 1134 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CTBSQ01459 385 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 STIM1Q13586 685 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 RAPGEF1Q13905 1077 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 GRM3Q14832 879 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CYTH1Q15438 398 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CFAP58Q5T655 872 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PNCKQ6P2M8 343 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 TMEM135Q86UB9 458 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CAMK1DQ8IU85 385 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SMARCE1Q969G3 411 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 C18orf8Q96DM3 657 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 RNF31Q96EP0 1072 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM81BQ96LP2 452 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 ZNF641Q96N77 438 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 FRMD8Q9BZ67 464 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 SUFUQ9UMX1 484 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 MAP4K5Q9Y4K4 846 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 OAS3Q9Y6K5 1087 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-203ENST00000409219 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 GOLGA8SH3BPF8 625 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 DNAJB5O75953 348 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 CLCN1P35523 988 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 DLSTP36957 453 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 MRPL49Q13405 166 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 MAP7Q14244 749 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 CDO1Q16878 200 aa12.84□□□□□ -0.35
CHRNA1-203ENST00000409219 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms