RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 POLR3BQ9NW08 1133 aaPredicted RBP18.97■□□□□ 0.63
USP39-202ENST00000409025 TBC1D14Q9P2M4 693 aa18.97■□□□□ 0.63
USP39-202ENST00000409025 ZNF197O14709 1029 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 PENKP01210 267 aaPredicted RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 CCDC166P0CW27 439 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 ARRB2P32121 409 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 RPL26P61254 145 aaKnown RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 GRASPQ7Z6J2 395 aaPredicted RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 CAMK1DQ8IU85 385 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 OR6K2Q8NGY2 324 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 STN1Q9H668 368 aaKnown RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 MAGEE1Q9HCI5 957 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 PNPOQ9NVS9 261 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 RPL26L1Q9UNX3 145 aaKnown RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 GRXCR1A8MXD5 290 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 NEDD8-MDP1E9PL57 170 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 PER2O15055 1255 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 RBP1P09455 135 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 FDXRP22570 491 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 TARSP26639 723 aaKnown RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 HLA-FP30511 346 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 HSF5Q4G112 596 aaPredicted RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 ZNF549Q6P9A3 640 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 ELMSAN1Q6PJG2 1045 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 PAF1Q8N7H5 531 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 ZNF557Q8N988 423 aaPredicted RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 IRF7Q92985 503 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 UBXN10Q96LJ8 280 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 RILPQ96NA2 401 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 SAMD11Q96NU1 681 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 TUBB6Q9BUF5 446 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 BBS2Q9BXC9 721 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 UNKQ9C0B0 810 aaKnown RBP18.96■□□□□ 0.63
USP39-202ENST00000409025 FKBPLQ9UIM3 349 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 ZNF711Q9Y462 761 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 NUMBLQ9Y6R0 609 aa18.96■□□□□ 0.63
USP39-202ENST00000409025 NOTCH4Q99466 2003 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 PFDN6O15212 129 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 DLX3O60479 287 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 SOCS5O75159 536 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 NDUFS3O75489 264 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 PRAMEF12O95522 483 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 CA3P07451 260 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 MC4RP32245 332 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 GPM6BQ13491 265 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 ACAP2Q15057 778 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 ZNF77Q15935 545 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 TECRLQ5HYJ1 363 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 RYBPQ8N488 228 aaPredicted RBP18.95■□□□□ 0.62
USP39-202ENST00000409025 PIH1D2Q8WWB5 315 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 RPL10LQ96L21 214 aaKnown RBP18.95■□□□□ 0.62
USP39-202ENST00000409025 AARSD1Q9BTE6 412 aaKnown RBP18.95■□□□□ 0.62
USP39-202ENST00000409025 HTATIP2Q9BUP3 242 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 GPR63Q9BZJ6 419 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 TNKS2Q9H2K2 1166 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 ATP13A3Q9H7F0 1226 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 POPDC3Q9HBV1 291 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 SLC40A1Q9NP59 571 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 SPHK2Q9NRA0 654 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 SLC25A13Q9UJS0 675 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 VPS9D1Q9Y2B5 631 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 PKP3Q9Y446 797 aa18.95■□□□□ 0.62
USP39-202ENST00000409025 UBA6A0AVT1 1052 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 FCHO1O14526 889 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 HTRA2O43464 458 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 WISP3O95389 354 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 PIGNO95427 931 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 POU2F2P09086 479 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 PRSS56P0CW18 603 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 SRCP12931 536 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 CTPS1P17812 591 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 CTSOP43234 321 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 RASSF2P50749 326 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 SNRPD1P62314 119 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 USP4Q13107 963 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 CTC1Q2NKJ3 1217 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 FUT11Q495W5 492 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 DGKKQ5KSL6 1271 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ASRGL1Q7L266 308 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ALYREFQ86V81 257 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 OR2AP1Q8NGE2 309 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 DRC3Q9H069 523 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 CCDC68Q9H2F9 335 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 BPIFA1Q9NP55 256 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 HAO1Q9UJM8 370 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 HCFC2Q9Y5Z7 792 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 H7C0S8 307 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 TRAFD1O14545 582 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 HNRNPCL1O60812 293 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 CCDC22O60826 627 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ZNF821O75541 412 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 T-ENOLP0DO92 83 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 NQO1P15559 274 aaKnown RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 TCF3P15923 654 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 ATP5F1P24539 256 aaPredicted RBP18.94■□□□□ 0.62
USP39-202ENST00000409025 NAGLUP54802 743 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 RCN2Q14257 317 aa18.94■□□□□ 0.62
USP39-202ENST00000409025 PTPRRQ15256 657 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms