RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FSD1LQ9BXM9 530 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 CEP41Q9BYV8 373 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 RHOJQ9H4E5 214 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TRPV5Q9NQA5 729 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 VPS45Q9NRW7 570 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 MRGBPQ9NV56 204 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 COPG2Q9UBF2 871 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 NUDT5Q9UKK9 219 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 ZCWPW2A0A1B0GU75 182 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 E9PAM4 449 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 SPECC1L-ADORA2AF8WAN1 911 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 SLCO1B7G3V0H7 640 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 COCHO43405 550 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 TBX18O95935 607 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 CKMP06732 381 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 T-ENOLP0DO92 83 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 PFKLP17858 780 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 CRABP2P29373 138 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 ATP5C1P36542 298 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 ABCE1P61221 599 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 HNRNPDQ14103 355 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 PON2Q15165 354 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 TSNAXIP1Q2TAA8 658 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 DGKKQ5KSL6 1271 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 MFSD6LQ8IWD5 586 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 UMODL1-AS1Q8N2C9 162 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 KDF1Q8NAX2 398 aaPredicted RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 GAB3Q8WWW8 586 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 STON2Q8WXE9 905 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 PTCD3Q96EY7 689 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 NACA2Q9H009 215 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC25A51Q9H1U9 297 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 C12orf65Q9H3J6 166 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 DCLRE1BQ9H816 532 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 CD248Q9HCU0 757 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 ANLNQ9NQW6 1124 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 TAGLN3Q9UI15 199 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 HBS1LQ9Y450 684 aaKnown RBP12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
SMARCB1-203ENST00000407082 NUP205Q92621 2012 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 DENND4CQ5VZ89 1909 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 A0A096LPK6 155 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 GOLGA8QA0A0J9YX86 632 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 GOLGA8OA6NCC3 632 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 C4orf47A7E2U8 309 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 GOLGA8NF8WBI6 632 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 MAFKO60675 156 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 TRIM13O60858 407 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 CIB2O75838 187 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 EPN2O95208 641 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 MPLP40238 635 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 HARS2P49590 506 aaKnown RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC12A2P55011 1212 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 AQP5P55064 265 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 RING1Q06587 406 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 TRIP4Q15650 581 aaPredicted RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 HSP90AA5PQ58FG0 334 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 CFAP157Q5JU67 520 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 MBLAC2Q68D91 279 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 BTN2A3PQ96KV6 586 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 FCRL3Q96P31 734 aaPredicted RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 RANBP9Q96S59 729 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 GPR22Q99680 433 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 MECRQ9BV79 373 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 SMG9Q9H0W8 520 aaKnown RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 C1orf21Q9H246 121 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 IARS2Q9NSE4 1012 aaKnown RBP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 TDP1Q9NUW8 608 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms