RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 HCAR2Q8TDS4 363 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CENPIQ92674 756 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FRMD8Q9BZ67 464 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CARS2Q9HA77 564 aaKnown RBP11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PDP2Q9P2J9 529 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 MOSPD1Q9UJG1 213 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 BICDL2A1A5D9 508 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CACNB4O00305 520 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TEX33O43247 280 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TACC2O95359 2948 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 DLGAP3O95886 979 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 MMEP08473 750 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 XPAP23025 273 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 COL8A1P27658 744 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SNX16P57768 344 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CTBSQ01459 385 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RAD51Q06609 339 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KLRB1Q12918 225 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 NAA35Q5VZE5 725 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 AFMIDQ63HM1 303 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PNCKQ6P2M8 343 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SLC30A9Q6PML9 568 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ARCQ7LC44 396 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TMEM135Q86UB9 458 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FAM129CQ86XR2 697 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 APOBEC4Q8WW27 367 aaKnown RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CASKIN2Q8WXE0 1202 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ECHDC3Q96DC8 303 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FAM81BQ96LP2 452 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 COQ10AQ96MF6 247 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RETREG1Q9H6L5 497 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GPN2Q9H9Y4 310 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 AKAP7Q9P0M2 348 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SUFUQ9UMX1 484 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PCYT1BQ9Y5K3 369 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FHOD1Q9Y613 1164 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KCNMB2Q9Y691 235 aa11.9□□□□□ -0.5
SPTLC1P3-201ENST00000403408 F8P00451 2351 aa11.9□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PDZD2O15018 2839 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MTORP42345 2549 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TTC24A2A3L6 582 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GTPBP10A4D1E9 387 aaKnown RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ZSCAN5CA6NGD5 496 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CHRNB2P17787 502 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 STAT1P42224 750 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GPR3P46089 330 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GNPDA1P46926 289 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MC2RQ01718 297 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CLPPQ16740 277 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ERAP2Q6P179 960 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 C16orf46Q6P387 395 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RFLNAQ6ZTI6 216 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DPPA4Q7L190 304 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ARHGAP22Q7Z5H3 698 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ZNF354CQ86Y25 554 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DNAAF5Q86Y56 855 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NRSN1Q8IZ57 195 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CBARPQ8N350 705 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TSEN2Q8NCE0 465 aaKnown RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NLGN4YQ8NFZ3 816 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLC20A1Q8WUM9 679 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 STARD8Q92502 1023 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CCDC34Q96HJ3 373 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ZNF641Q96N77 438 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TEX101Q9BY14 249 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 LRRC19Q9H756 370 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 WDR26Q9H7D7 661 aa11.89□□□□□ -0.51
SPTLC1P3-201ENST00000403408 POLEQ07864 2286 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 A1L4Q6 167 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 A8MU76 341 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 WASH4PA8MWX3 477 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MYCLP1P12525 358 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ZNF28P17035 718 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ADCY8P40145 1251 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PPP1R2P41236 205 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DCAF12Q5T6F0 453 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TMEM71Q6P5X7 295 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 BRAT1Q6PJG6 821 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SRLQ86TD4 932 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 UMODL1-AS1Q8N2C9 162 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FAM172AQ8WUF8 416 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ASPSCR1Q9BZE9 553 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms