RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 CYP2A6P11509 494 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 C6P13671 934 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 MAOBP27338 520 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 DRG2P55039 364 aaKnown RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 CRADDP78560 199 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SIM2Q14190 667 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 PTPRCAPQ14761 206 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 POU6F1Q14863 301 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 LPAL2Q16609 132 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 KIAA0895LQ68EN5 471 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 PPP1R21Q6ZMI0 780 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 Q6ZVL8 140 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 PCGF5Q86SE9 256 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 TRIM69Q86WT6 500 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 AGGF1Q8N302 714 aaeCLIP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 MCUQ8NE86 351 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 BRSK1Q8TDC3 778 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 CXorf40AQ8TE69 158 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ZC3H10Q96K80 434 aaKnown RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SERPINB12Q96P63 405 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 C1QTNF2Q9BXJ5 285 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SLC17A9Q9BYT1 436 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ZNF711Q9Y462 761 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 KCTD3Q9Y597 815 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ARL5AQ9Y689 179 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 CFAP54Q96N23 3096 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SLC31A1O15431 190 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SESN2P58004 480 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 GUCY2DQ02846 1103 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 CREB5Q02930 508 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ARHGEF7Q14155 803 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 CCDC38Q502W7 563 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 GLE1Q53GS7 698 aaKnown RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 PMS2CLQ68D20 193 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 KIAA1161Q6NSJ0 714 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ZC3H14Q6PJT7 736 aaKnown RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 HOOK3Q86VS8 718 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 TTC30BQ8N4P2 665 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 COQ10AQ96MF6 247 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 HSPA12BQ96MM6 686 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 EPC1Q9H2F5 836 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 SPEGQ15772 3267 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 WNT9AO14904 365 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 LDB2O43679 373 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 TM7SF2O76062 418 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 RECQL5O94762 991 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-204ENST00000401473 C1SP09871 688 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ZNF30P17039 623 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 NFKBIAP25963 317 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 HMGCLP35914 325 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ETV3P41162 512 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 NBL1P41271 181 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 MAGEA3P43357 314 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 STC1P52823 247 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 MORF4L2Q15014 288 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 FNBP1LQ5T0N5 605 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 PRR23BQ6ZRT6 265 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 CEP68Q76N32 757 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ARMCX6Q7L4S7 300 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 GLT6D1Q7Z4J2 308 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 TECPR1Q7Z6L1 1165 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 PELI3Q8N2H9 469 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 SUMF1Q8NBK3 374 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ZNF778Q96MU6 729 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 KLF6Q99612 283 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-204ENST00000401473 GPR63Q9BZJ6 419 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 EPB41L5Q9HCM4 733 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 BPIFA1Q9NP55 256 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 WHRNQ9P202 907 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ANAPC5Q9UJX4 755 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 CABIN1Q9Y6J0 2220 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 ZNF292O60281 2723 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 SCN8AQ9UQD0 1980 aa15.94■□□□□ 0.14
HMGA1-204ENST00000401473 RAD51BO15315 384 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 SLC4A1P02730 911 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 RHOXF2BP0C7M4 288 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 CCR5P51681 352 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 NHLH1Q02575 133 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 MSS51Q4VC12 460 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 KDM7AQ6ZMT4 941 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 LPCAT2Q7L5N7 544 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 MPP5Q8N3R9 675 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 CENPTQ96BT3 561 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 RHOXF2Q9BQY4 288 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 PCED1AQ9H1Q7 454 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 TRABDQ9H4I3 376 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 FZD3Q9NPG1 666 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.93■□□□□ 0.143e-28■■■□□ 14.8
HMGA1-204ENST00000401473 HACD3Q9P035 362 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 IL17CQ9P0M4 197 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 CD84Q9UIB8 345 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 PLXNA2O75051 1894 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 LZTS3O60299 673 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-204ENST00000401473 MLNP12872 115 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 ITPKAP23677 461 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 MGAT1P26572 445 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 SPINT3P49223 89 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 SARNPP82979 210 aaKnown RBP15.93■□□□□ 0.14
HMGA1-204ENST00000401473 ACOX1Q15067 660 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms