RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 POU5F2Q8N7G0 328 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 HJURPQ8NCD3 748 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RMDN1Q96DB5 314 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SCLYQ96I15 445 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PRICKLE1Q96MT3 831 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF570Q96NI8 536 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 VN1R3Q9BXE9 311 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ERVK-6Q9BXR3 956 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 WDR55Q9H6Y2 383 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TRIM17Q9Y577 477 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ARL5AQ9Y689 179 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 LOC100653049A0A140TA62 436 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 H7C0S8 307 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 KRT34O76011 436 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CD1DP15813 335 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TTPAP49638 278 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SCNN1BP51168 640 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CLCN4P51793 760 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ADARP55265 1226 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 STX5Q13190 355 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CYTH1Q15438 398 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 HOMEZQ8IX15 550 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 NKAPQ8N5F7 415 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 DEFB118Q96PH6 123 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 DERL2Q9GZP9 239 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF510Q9Y2H8 683 aa17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 MRPL42Q9Y6G3 142 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-204ENST00000399084 LCHNA4D1U4 455 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 GOLGA8CPA6NN73 597 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SYCE1LA8MT33 242 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ANKRD66B4E2M5 251 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SDHDO14521 159 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 F11P03951 625 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ANPEPP15144 967 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF37AP17032 561 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ATP4BP51164 291 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CCL23P55773 120 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RPL26P61254 145 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SULT2A1Q06520 285 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PDAP1Q13442 181 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 GALNT3Q14435 633 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF678Q5SXM1 525 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 GPR158Q5T848 1215 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RNF219Q5W0B1 726 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 NXNQ6DKJ4 435 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF549Q6P9A3 640 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 GLT6D1Q7Z4J2 308 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CUZD1Q86UP6 607 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PGAM4Q8N0Y7 254 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PELI3Q8N2H9 469 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SPATA6LQ8N4H0 392 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 STAG3L4Q8TBR4 150 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ANKRD49Q8WVL7 239 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 N4BP2L2Q92802 583 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF689Q96CS4 500 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 GTSE1Q9NYZ3 720 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SPG21Q9NZD8 308 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 LRCH1Q9Y2L9 728 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 KCTD3Q9Y597 815 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TET1Q8NFU7 2136 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 MICAL3Q7RTP6 2002 aa17.71■□□□□ 0.43
HLA-DQB1-204ENST00000399084 NDUFS3O75489 264 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PRLP01236 227 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 URODP06132 367 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PFKLP17858 780 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MAPK8P45983 427 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 XIAPP98170 497 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CDC16Q13042 620 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SQLEQ14534 574 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CXorf57Q6NSI4 855 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DNAJB7Q7Z6W7 309 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CMTR2Q8IYT2 770 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CLYBLQ8N0X4 340 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 STK40Q8N2I9 435 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OR13C4Q8NGS5 318 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 AGR3Q8TD06 166 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KIAA1191Q96A73 305 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 S100A14Q9HCY8 104 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PFDN4Q9NQP4 134 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NMRK1Q9NWW6 199 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CRYL1Q9Y2S2 319 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TRAF6Q9Y4K3 522 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RAI2Q9Y5P3 530 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TTC24A2A3L6 582 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CBX4O00257 560 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PRRG1O14668 218 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OLFM2O95897 454 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 C1RP00736 705 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RPL17P18621 184 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PPM1AP35813 382 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ACADVLP49748 655 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 AP1S1P61966 158 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms