RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 KCNJ1P48048 391 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MARCKSL1P49006 195 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RASSF2P50749 326 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 NR1H2P55055 460 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CHIT1Q13231 466 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PFKFB4Q16877 469 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 HES5Q5TA89 166 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PLA2G4FQ68DD2 849 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PADI6Q6TGC4 694 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MCOLN3Q8TDD5 553 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CHURC1Q8WUH1 139 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 EDEM2Q9BV94 578 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TARS2Q9BW92 718 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 GPR88Q9GZN0 384 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PCIF1Q9H4Z3 704 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 VSX1Q9NZR4 365 aaPredicted RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ASH2LQ9UBL3 628 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 A0A0U1RQK1 487 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF320A2RRD8 509 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MAGEA13PA6NCF6 341 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 H7BY64 318 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RGS13O14921 159 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 DCLK1O15075 740 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 GALK1P51570 392 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 NCALDP61601 193 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RRP1BQ14684 758 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TARBP2Q15633 366 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP2A13Q16696 494 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TOR1AIP1Q5JTV8 583 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ARHGEF16Q5VV41 709 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 AADACL2Q6P093 401 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TTC27Q6P3X3 843 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 DCLRE1AQ6PJP8 1040 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 RIBC1Q8N443 379 aaPredicted RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 CKAP2Q8WWK9 683 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SLCO2A1Q92959 643 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 OMA1Q96E52 524 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TOE1Q96GM8 510 aaKnown RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 MAGEB18Q96M61 343 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 AGAP2Q99490 1192 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 EFHD1Q9BUP0 239 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ADAM19Q9H013 955 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 PNPLA8Q9NP80 782 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 SELENONQ9NZV5 590 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 TXNDC16Q9P2K2 825 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 DMDP11532 3685 aa6.61□□□□□ -1.35
TM9SF4-202ENST00000398022 ANGPT2O15123 496 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP26A1O43174 497 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 GCATO75600 419 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TOM1L1O75674 476 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 KRT37O76014 449 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 KRT19P08727 400 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CHRM5P08912 532 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MLNP12872 115 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PRKCAP17252 672 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 LPOP22079 712 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ADSSP30520 456 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC7A1P30825 629 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 GLO1Q04760 184 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RARS2Q5T160 578 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 APOBEC3HQ6NTF7 200 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TRPV3Q8NET8 790 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 OR6B3Q8NGW1 331 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PITPNM3Q9BZ71 974 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ZC4H2Q9NQZ6 224 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ZSCAN32Q9NX65 697 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 NUP50Q9UKX7 468 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 SAMHD1Q9Y3Z3 626 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MAD1L1Q9Y6D9 718 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MYH11P35749 1972 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 LOC285556D6RIA3 1793 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 EIF4E1BA6NMX2 242 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 C2orf74A8MZ97 194 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 DVL2O14641 736 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 BCAS2O75934 225 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 GDF11O95390 407 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PRAMEF12O95522 483 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 DHRS4L1P0CG22 281 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CKMT1AP12532 417 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 IL11P20809 199 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ATXN3P54252 364 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 STARD6P59095 220 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RAB4BP61018 213 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RPS26P62854 115 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ART3Q13508 389 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 AOC3Q16853 763 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM98BQ52LJ0 330 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 EPC2Q52LR7 807 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CDKL4Q5MAI5 379 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 BRMS1LQ5PSV4 323 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 KRT39Q6A163 491 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms