RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 IQCDQ96DY2 449 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 MRFAP1L1Q96HT8 127 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 ZNF641Q96N77 438 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 GANQ9H2C0 597 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 SPATS2LQ9NUQ6 558 aaKnown RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 TUBD1Q9UJT1 453 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 NOCTQ9UK39 431 aaKnown RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.16■□□□□ 0.18
CUX2-202ENST00000397643 IGHV5-10-1A0A0J9YXX1 117 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 WASH4PA8MWX3 477 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 GP1BBP13224 206 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 CHRNB2P17787 502 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 CR2P20023 1033 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 EPHB2P29323 1055 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 POLR2FP61218 127 aaKnown RBP16.15■□□□□ 0.18
CUX2-202ENST00000397643 GRM3Q14832 879 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 AMZ1Q400G9 498 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 PARP15Q460N3 678 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 LIPIQ6XZB0 460 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 VSTM4Q8IW00 320 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 UMODL1-AS1Q8N2C9 162 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 GPBAR1Q8TDU6 330 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 CCDC74BQ96LY2 380 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 C11orf70Q9BRQ4 267 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 CYP4F12Q9HCS2 524 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 SEPT3Q9UH03 358 aa16.15■□□□□ 0.18
CUX2-202ENST00000397643 PRSS38A1L453 326 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 KELP23276 732 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 CD1CP29017 333 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 UGT1A3P35503 534 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 CASRP41180 1078 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 ATP1A2P50993 1020 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 FMO1Q01740 532 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 PTP4A2Q12974 167 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 IGFBP7Q16270 282 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 CLPPQ16740 277 aaPredicted RBP16.14■□□□□ 0.17
CUX2-202ENST00000397643 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 ECHDC3Q96DC8 303 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 TAAR9Q96RI9 348 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 STK33Q9BYT3 514 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 CDH19Q9H159 772 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 LRRC19Q9H756 370 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 AKAP7Q9P0M2 348 aaPredicted RBP16.14■□□□□ 0.17
CUX2-202ENST00000397643 UBA2Q9UBT2 640 aaPredicted RBP16.14■□□□□ 0.17
CUX2-202ENST00000397643 ST14Q9Y5Y6 855 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 B3GALT1Q9Y5Z6 326 aa16.14■□□□□ 0.17
CUX2-202ENST00000397643 SPTBN1Q01082 2364 aaKnown RBP16.14■□□□□ 0.17
CUX2-202ENST00000397643 UTP20O75691 2785 aaKnown RBP16.13■□□□□ 0.17
CUX2-202ENST00000397643 J3KR12 359 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 EPHB6O15197 1021 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 FUCA1P04066 466 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 FGF1P05230 155 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 TPM1P09493 284 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 CCNB1P14635 433 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 CSF2RBP32927 897 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
CUX2-202ENST00000397643 LIMK2P53671 638 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 GSCP56915 257 aaPredicted RBP16.13■□□□□ 0.17
CUX2-202ENST00000397643 TRIM14Q14142 442 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 AFMIDQ63HM1 303 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 SLFN11Q7Z7L1 901 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 SLC30A5Q8TAD4 765 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 PATE1Q8WXA2 126 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 NSMCE3Q96MG7 304 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 WDR26Q9H7D7 661 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 NLRC4Q9NPP4 1024 aa16.13■□□□□ 0.17
CUX2-202ENST00000397643 UNC79Q9P2D8 2635 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 A0A1W2PQJ5 194 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 PRAMEF11O60813 436 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 ELFN1P0C7U0 828 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 THRAP10827 490 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 ALDH4A1P30038 563 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 STAT1P42224 750 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 CSNK1DP48730 415 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 CDR2Q01850 454 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 TRA2AQ13595 282 aaKnown RBP eCLIP16.12■□□□□ 0.17
CUX2-202ENST00000397643 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 PNCKQ6P2M8 343 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 DPPA4Q7L190 304 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 IL22RA1Q8N6P7 574 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 TSEN2Q8NCE0 465 aaKnown RBP16.12■□□□□ 0.17
CUX2-202ENST00000397643 ZDHHC1Q8WTX9 485 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 PTCD2Q8WV60 388 aaKnown RBP16.12■□□□□ 0.17
CUX2-202ENST00000397643 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
CUX2-202ENST00000397643 ART4Q93070 314 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 DDA1Q9BW61 102 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 TAAR2Q9P1P5 351 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 MAN2B2Q9Y2E5 1009 aa16.12■□□□□ 0.17
CUX2-202ENST00000397643 RHPN2P1A8MT19 583 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 ECEL1O95672 775 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CEACAM5P06731 702 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 MYCLP1P12525 358 aaPredicted RBP16.11■□□□□ 0.17
CUX2-202ENST00000397643 GPD1P21695 349 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 AK4P27144 223 aaPredicted RBP16.11■□□□□ 0.17
CUX2-202ENST00000397643 SERPINA4P29622 427 aa16.11■□□□□ 0.17
CUX2-202ENST00000397643 CDC25BP30305 580 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms