RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ANKRD42Q8N9B4 389 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PDPRQ8NCN5 879 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NR1H4Q96RI1 486 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ASAH2Q9NR71 780 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SIRT5Q9NXA8 310 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TBK1Q9UHD2 729 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MYOFQ9NZM1 2061 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HELZP42694 1942 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MYLKQ15746 1914 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TRAV19A0A0A6YYK7 116 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 A0A1W2PQH9 124 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 FKBP9O95302 570 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PITX1P78337 314 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 BOP1Q14137 746 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PCLAFQ15004 111 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 EPGNQ6UW88 154 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NXPE3Q969Y0 559 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ZBTB10Q96DT7 871 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 THOC1Q96FV9 657 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 CINPQ9BW66 212 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SDR39U1Q9NRG7 319 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 GOLGA8TH3BQL2 631 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 RPS17P08708 135 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 FCGR1AP12314 374 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 IDO1P14902 403 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 USP10Q14694 798 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PDGFRLQ15198 375 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 RWDD4Q6NW29 188 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MACC1Q6ZN28 852 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 DSG4Q86SJ6 1040 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 UCMAQ8WVF2 138 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NCLNQ969V3 563 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 RYDENQ9NUL5 291 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TMED5Q9Y3A6 229 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ERICH4A6NGS2 130 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 GYG2O15488 501 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 KATNA1O75449 491 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 GGT5P36269 586 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NUDT1P36639 197 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 CACNG1Q06432 222 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ARMC12Q5T9G4 340 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 KLHDC8AQ8IYD2 350 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PGAM4Q8N0Y7 254 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 LPPQ93052 612 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MFSD3Q96ES6 412 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF668Q96K58 619 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 GPATCH2LQ9NWQ4 482 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SCN5AQ14524 2016 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SPECC1L-ADORA2AF8WAN1 911 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 CLDN5O00501 218 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 RPL3P39023 403 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 IL2P60568 153 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HERVK_113P63132 956 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 DPP10Q8N608 796 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SCAMP5Q8TAC9 235 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 EDEM1Q92611 657 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TBC1D10AQ9BXI6 508 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ERVK-6Q9BXR3 956 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ITM2CQ9NQX7 267 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 EPS15L1Q9UBC2 864 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 AQP12BA6NM10 295 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 VAPBO95292 243 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 YY1P25490 414 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ARNTP27540 789 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 HNMTP50135 292 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 BNIP2Q12982 314 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 KPNB1Q14974 876 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TPRG1Q6ZUI0 275 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 AQP12AQ8IXF9 295 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 KYQ8NBH2 561 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ARMC2Q8NEN0 867 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 OR4L1Q8NH43 312 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 RDH12Q96NR8 316 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 AGAP3Q96P47 875 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 C1QTNF1Q9BXJ1 281 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 EPB41L1Q9H4G0 881 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SLCO1B3Q9NPD5 702 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ZIM2Q9NZV7 527 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 NUP210Q8TEM1 1887 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CASQ2O14958 399 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 S1PR4O95977 384 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 GLUD1P00367 558 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PMLP29590 882 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 RECQLP46063 649 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 USP4Q13107 963 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 DUSP4Q13115 394 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CXorf40BQ96DE9 158 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PPP1R16AQ96I34 528 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 LRRC3Q9BY71 257 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SIK2Q9H0K1 926 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SLC40A1Q9NP59 571 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SYBUQ9NX95 663 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 NYNRINQ9P2P1 1898 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SPAG17Q6Q759 2223 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 G3V2L1 256 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ESRRBO95718 433 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms